Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm13436-201ENSMUST00000120418 567 ntBASIC16.67■□□□□ 0.26
Trim33Q99PP7 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.67■□□□□ 0.26
Trim33Q99PP7 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim33Q99PP7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim33Q99PP7 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim33Q99PP7 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim33Q99PP7 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim33Q99PP7 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim33Q99PP7 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim33Q99PP7 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim33Q99PP7 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim33Q99PP7 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trim33Q99PP7 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.66■□□□□ 0.26
Trim33Q99PP7 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim33Q99PP7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim33Q99PP7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.66■□□□□ 0.26
Trim33Q99PP7 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim33Q99PP7 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim33Q99PP7 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim33Q99PP7 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.66■□□□□ 0.26
Trim33Q99PP7 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim33Q99PP7 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim33Q99PP7 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.66■□□□□ 0.26
Trim33Q99PP7 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim33Q99PP7 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.66■□□□□ 0.26
Trim33Q99PP7 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim33Q99PP7 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim33Q99PP7 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim33Q99PP7 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim33Q99PP7 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim33Q99PP7 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim33Q99PP7 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.66■□□□□ 0.26
Trim33Q99PP7 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim33Q99PP7 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trim33Q99PP7 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim33Q99PP7 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Trim33Q99PP7 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim33Q99PP7 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim33Q99PP7 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim33Q99PP7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trim33Q99PP7 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Trim33Q99PP7 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim33Q99PP7 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim33Q99PP7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.65■□□□□ 0.26
Trim33Q99PP7 Gm43799-201ENSMUST00000201845 579 ntBASIC16.65■□□□□ 0.26
Trim33Q99PP7 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trim33Q99PP7 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim33Q99PP7 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim33Q99PP7 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim33Q99PP7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim33Q99PP7 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim33Q99PP7 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim33Q99PP7 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim33Q99PP7 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim33Q99PP7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim33Q99PP7 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Trim33Q99PP7 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Trim33Q99PP7 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim33Q99PP7 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim33Q99PP7 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim33Q99PP7 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim33Q99PP7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim33Q99PP7 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim33Q99PP7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim33Q99PP7 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.64■□□□□ 0.25
Trim33Q99PP7 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim33Q99PP7 Gm13559-201ENSMUST00000120476 863 ntBASIC16.64■□□□□ 0.25
Trim33Q99PP7 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.64■□□□□ 0.25
Trim33Q99PP7 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim33Q99PP7 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim33Q99PP7 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim33Q99PP7 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim33Q99PP7 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
Trim33Q99PP7 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim33Q99PP7 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim33Q99PP7 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trim33Q99PP7 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim33Q99PP7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim33Q99PP7 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim33Q99PP7 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trim33Q99PP7 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim33Q99PP7 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim33Q99PP7 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim33Q99PP7 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim33Q99PP7 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Trim33Q99PP7 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim33Q99PP7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim33Q99PP7 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trim33Q99PP7 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.63■□□□□ 0.25
Trim33Q99PP7 AC153937.1-201ENSMUST00000218734 412 ntBASIC16.63■□□□□ 0.25
Trim33Q99PP7 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trim33Q99PP7 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim33Q99PP7 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim33Q99PP7 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim33Q99PP7 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim33Q99PP7 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim33Q99PP7 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim33Q99PP7 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim33Q99PP7 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Trim33Q99PP7 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms