Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim34aQ99PP6 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim34aQ99PP6 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim34aQ99PP6 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Trim34aQ99PP6 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.71■□□□□ 0.91
Trim34aQ99PP6 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Trim34aQ99PP6 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim34aQ99PP6 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim34aQ99PP6 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim34aQ99PP6 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim34aQ99PP6 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC20.7■□□□□ 0.9
Trim34aQ99PP6 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC20.7■□□□□ 0.9
Trim34aQ99PP6 Gm8969-201ENSMUST00000199694 526 ntBASIC20.7■□□□□ 0.9
Trim34aQ99PP6 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim34aQ99PP6 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC20.7■□□□□ 0.9
Trim34aQ99PP6 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC20.7■□□□□ 0.9
Trim34aQ99PP6 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim34aQ99PP6 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim34aQ99PP6 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim34aQ99PP6 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim34aQ99PP6 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim34aQ99PP6 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim34aQ99PP6 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim34aQ99PP6 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim34aQ99PP6 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim34aQ99PP6 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim34aQ99PP6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim34aQ99PP6 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC20.69■□□□□ 0.9
Trim34aQ99PP6 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC20.69■□□□□ 0.9
Trim34aQ99PP6 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Trim34aQ99PP6 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
Trim34aQ99PP6 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
Trim34aQ99PP6 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim34aQ99PP6 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim34aQ99PP6 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim34aQ99PP6 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.69■□□□□ 0.9
Trim34aQ99PP6 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim34aQ99PP6 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Trim34aQ99PP6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim34aQ99PP6 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.68■□□□□ 0.9
Trim34aQ99PP6 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Trim34aQ99PP6 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim34aQ99PP6 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim34aQ99PP6 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Trim34aQ99PP6 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim34aQ99PP6 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim34aQ99PP6 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim34aQ99PP6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim34aQ99PP6 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim34aQ99PP6 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim34aQ99PP6 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim34aQ99PP6 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim34aQ99PP6 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim34aQ99PP6 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim34aQ99PP6 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim34aQ99PP6 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim34aQ99PP6 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim34aQ99PP6 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim34aQ99PP6 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim34aQ99PP6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Trim34aQ99PP6 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Trim34aQ99PP6 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim34aQ99PP6 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Trim34aQ99PP6 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC20.67■□□□□ 0.9
Trim34aQ99PP6 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim34aQ99PP6 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim34aQ99PP6 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim34aQ99PP6 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim34aQ99PP6 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC20.67■□□□□ 0.9
Trim34aQ99PP6 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim34aQ99PP6 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim34aQ99PP6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim34aQ99PP6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Trim34aQ99PP6 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20.67■□□□□ 0.9
Trim34aQ99PP6 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim34aQ99PP6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim34aQ99PP6 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Trim34aQ99PP6 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim34aQ99PP6 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim34aQ99PP6 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim34aQ99PP6 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim34aQ99PP6 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC20.66■□□□□ 0.9
Trim34aQ99PP6 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim34aQ99PP6 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC20.66■□□□□ 0.9
Trim34aQ99PP6 Gm18195-201ENSMUST00000207604 706 ntBASIC20.66■□□□□ 0.9
Trim34aQ99PP6 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC20.66■□□□□ 0.9
Trim34aQ99PP6 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Trim34aQ99PP6 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim34aQ99PP6 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim34aQ99PP6 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim34aQ99PP6 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim34aQ99PP6 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim34aQ99PP6 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim34aQ99PP6 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.66■□□□□ 0.9
Trim34aQ99PP6 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC20.66■□□□□ 0.9
Trim34aQ99PP6 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim34aQ99PP6 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim34aQ99PP6 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim34aQ99PP6 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim34aQ99PP6 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms