Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh15Q99PJ1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh15Q99PJ1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh15Q99PJ1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh15Q99PJ1 Gm13127-201ENSMUST00000118978 1389 ntBASIC19.05■□□□□ 0.64
Pcdh15Q99PJ1 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh15Q99PJ1 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC19.05■□□□□ 0.64
Pcdh15Q99PJ1 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC19.04■□□□□ 0.64
Pcdh15Q99PJ1 Gm25406-201ENSMUST00000157599 105 ntBASIC19.04■□□□□ 0.64
Pcdh15Q99PJ1 Gm7229-201ENSMUST00000214719 1007 ntBASIC19.04■□□□□ 0.64
Pcdh15Q99PJ1 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh15Q99PJ1 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Pcdh15Q99PJ1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh15Q99PJ1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Pcdh15Q99PJ1 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh15Q99PJ1 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh15Q99PJ1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh15Q99PJ1 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh15Q99PJ1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh15Q99PJ1 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh15Q99PJ1 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh15Q99PJ1 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh15Q99PJ1 Mir8117-201ENSMUST00000184773 107 ntBASIC19.04■□□□□ 0.64
Pcdh15Q99PJ1 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC19.04■□□□□ 0.64
Pcdh15Q99PJ1 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC19.04■□□□□ 0.64
Pcdh15Q99PJ1 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC19.04■□□□□ 0.64
Pcdh15Q99PJ1 AC159114.1-201ENSMUST00000220349 266 ntBASIC19.04■□□□□ 0.64
Pcdh15Q99PJ1 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh15Q99PJ1 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh15Q99PJ1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh15Q99PJ1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh15Q99PJ1 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Pcdh15Q99PJ1 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh15Q99PJ1 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Pcdh15Q99PJ1 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh15Q99PJ1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh15Q99PJ1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh15Q99PJ1 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC19.03■□□□□ 0.64
Pcdh15Q99PJ1 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh15Q99PJ1 Gm27321-201ENSMUST00000185021 205 ntBASIC19.03■□□□□ 0.64
Pcdh15Q99PJ1 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC19.03■□□□□ 0.64
Pcdh15Q99PJ1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh15Q99PJ1 AC159106.1-201ENSMUST00000224421 690 ntBASIC19.03■□□□□ 0.64
Pcdh15Q99PJ1 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh15Q99PJ1 Gm15500-202ENSMUST00000071641 1019 ntBASIC19.03■□□□□ 0.64
Pcdh15Q99PJ1 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh15Q99PJ1 Gm5837-201ENSMUST00000191844 1369 ntBASIC19.03■□□□□ 0.64
Pcdh15Q99PJ1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh15Q99PJ1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.03■□□□□ 0.64
Pcdh15Q99PJ1 Gm4913-201ENSMUST00000117075 1290 ntBASIC19.02■□□□□ 0.64
Pcdh15Q99PJ1 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC19.02■□□□□ 0.64
Pcdh15Q99PJ1 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdh15Q99PJ1 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC19.02■□□□□ 0.64
Pcdh15Q99PJ1 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.02■□□□□ 0.64
Pcdh15Q99PJ1 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdh15Q99PJ1 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdh15Q99PJ1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdh15Q99PJ1 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.02■□□□□ 0.64
Pcdh15Q99PJ1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdh15Q99PJ1 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.02■□□□□ 0.63
Pcdh15Q99PJ1 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdh15Q99PJ1 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC19.02■□□□□ 0.63
Pcdh15Q99PJ1 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdh15Q99PJ1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdh15Q99PJ1 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh15Q99PJ1 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh15Q99PJ1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh15Q99PJ1 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh15Q99PJ1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.01■□□□□ 0.63
Pcdh15Q99PJ1 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.01■□□□□ 0.63
Pcdh15Q99PJ1 Gm15920-201ENSMUST00000118998 402 ntBASIC19.01■□□□□ 0.63
Pcdh15Q99PJ1 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh15Q99PJ1 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh15Q99PJ1 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh15Q99PJ1 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Pcdh15Q99PJ1 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.01■□□□□ 0.63
Pcdh15Q99PJ1 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh15Q99PJ1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdh15Q99PJ1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdh15Q99PJ1 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC19■□□□□ 0.63
Pcdh15Q99PJ1 Gm7222-201ENSMUST00000117512 906 ntBASIC19■□□□□ 0.63
Pcdh15Q99PJ1 Gm9172-201ENSMUST00000212092 954 ntBASIC19■□□□□ 0.63
Pcdh15Q99PJ1 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC19■□□□□ 0.63
Pcdh15Q99PJ1 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC19■□□□□ 0.63
Pcdh15Q99PJ1 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh15Q99PJ1 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh15Q99PJ1 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Pcdh15Q99PJ1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh15Q99PJ1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh15Q99PJ1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh15Q99PJ1 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh15Q99PJ1 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh15Q99PJ1 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdh15Q99PJ1 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh15Q99PJ1 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdh15Q99PJ1 Gm11764-201ENSMUST00000120221 623 ntBASIC19■□□□□ 0.63
Pcdh15Q99PJ1 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdh15Q99PJ1 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC19■□□□□ 0.63
Pcdh15Q99PJ1 AC124549.3-201ENSMUST00000225541 367 ntBASIC19■□□□□ 0.63
Pcdh15Q99PJ1 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms