Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.13■□□□□ 0.33
Cdh23Q99PF4 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.13■□□□□ 0.33
Cdh23Q99PF4 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh23Q99PF4 Gm6089-201ENSMUST00000197666 938 ntBASIC17.13■□□□□ 0.33
Cdh23Q99PF4 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.13■□□□□ 0.33
Cdh23Q99PF4 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh23Q99PF4 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh23Q99PF4 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.13■□□□□ 0.33
Cdh23Q99PF4 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh23Q99PF4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh23Q99PF4 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh23Q99PF4 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.12■□□□□ 0.33
Cdh23Q99PF4 Gm8396-201ENSMUST00000057361 823 ntBASIC17.12■□□□□ 0.33
Cdh23Q99PF4 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Cdh23Q99PF4 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh23Q99PF4 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh23Q99PF4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh23Q99PF4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh23Q99PF4 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh23Q99PF4 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh23Q99PF4 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.12■□□□□ 0.33
Cdh23Q99PF4 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh23Q99PF4 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh23Q99PF4 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh23Q99PF4 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh23Q99PF4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh23Q99PF4 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh23Q99PF4 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh23Q99PF4 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh23Q99PF4 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh23Q99PF4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh23Q99PF4 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh23Q99PF4 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh23Q99PF4 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh23Q99PF4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh23Q99PF4 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh23Q99PF4 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Cdh23Q99PF4 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh23Q99PF4 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.11■□□□□ 0.33
Cdh23Q99PF4 Gm18421-201ENSMUST00000204122 625 ntBASIC17.11■□□□□ 0.33
Cdh23Q99PF4 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh23Q99PF4 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh23Q99PF4 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh23Q99PF4 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh23Q99PF4 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh23Q99PF4 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh23Q99PF4 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh23Q99PF4 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Cdh23Q99PF4 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh23Q99PF4 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.11■□□□□ 0.33
Cdh23Q99PF4 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.11■□□□□ 0.33
Cdh23Q99PF4 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh23Q99PF4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh23Q99PF4 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.1■□□□□ 0.33
Cdh23Q99PF4 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.1■□□□□ 0.33
Cdh23Q99PF4 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.1■□□□□ 0.33
Cdh23Q99PF4 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh23Q99PF4 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh23Q99PF4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh23Q99PF4 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh23Q99PF4 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh23Q99PF4 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh23Q99PF4 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh23Q99PF4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh23Q99PF4 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cdh23Q99PF4 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.1■□□□□ 0.33
Cdh23Q99PF4 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh23Q99PF4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh23Q99PF4 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh23Q99PF4 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh23Q99PF4 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.09■□□□□ 0.33
Cdh23Q99PF4 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.09■□□□□ 0.33
Cdh23Q99PF4 Mir8112-201ENSMUST00000184382 131 ntBASIC17.09■□□□□ 0.33
Cdh23Q99PF4 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cdh23Q99PF4 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh23Q99PF4 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.09■□□□□ 0.33
Cdh23Q99PF4 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh23Q99PF4 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cdh23Q99PF4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh23Q99PF4 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh23Q99PF4 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh23Q99PF4 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh23Q99PF4 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.09■□□□□ 0.33
Cdh23Q99PF4 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.09■□□□□ 0.33
Cdh23Q99PF4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh23Q99PF4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh23Q99PF4 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh23Q99PF4 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cdh23Q99PF4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.09■□□□□ 0.33
Cdh23Q99PF4 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh23Q99PF4 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh23Q99PF4 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh23Q99PF4 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.09■□□□□ 0.33
Cdh23Q99PF4 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh23Q99PF4 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cdh23Q99PF4 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC17.09■□□□□ 0.33
Cdh23Q99PF4 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.08■□□□□ 0.33
Cdh23Q99PF4 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdh23Q99PF4 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdh23Q99PF4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms