Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.52■□□□□ 0.4
Tpgs1Q99MS8 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tpgs1Q99MS8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tpgs1Q99MS8 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tpgs1Q99MS8 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tpgs1Q99MS8 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Tpgs1Q99MS8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tpgs1Q99MS8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tpgs1Q99MS8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.52■□□□□ 0.39
Tpgs1Q99MS8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tpgs1Q99MS8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Tpgs1Q99MS8 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Tpgs1Q99MS8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpgs1Q99MS8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tpgs1Q99MS8 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpgs1Q99MS8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpgs1Q99MS8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tpgs1Q99MS8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tpgs1Q99MS8 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tpgs1Q99MS8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpgs1Q99MS8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.51■□□□□ 0.39
Tpgs1Q99MS8 Gm5587-201ENSMUST00000206270 674 ntBASIC17.51■□□□□ 0.39
Tpgs1Q99MS8 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tpgs1Q99MS8 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpgs1Q99MS8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Tpgs1Q99MS8 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpgs1Q99MS8 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpgs1Q99MS8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpgs1Q99MS8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpgs1Q99MS8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpgs1Q99MS8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tpgs1Q99MS8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tpgs1Q99MS8 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpgs1Q99MS8 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpgs1Q99MS8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpgs1Q99MS8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpgs1Q99MS8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpgs1Q99MS8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpgs1Q99MS8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.5■□□□□ 0.39
Tpgs1Q99MS8 Gm23634-201ENSMUST00000175071 91 ntBASIC17.5■□□□□ 0.39
Tpgs1Q99MS8 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.5■□□□□ 0.39
Tpgs1Q99MS8 Gm18421-201ENSMUST00000204122 625 ntBASIC17.5■□□□□ 0.39
Tpgs1Q99MS8 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpgs1Q99MS8 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpgs1Q99MS8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Tpgs1Q99MS8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Tpgs1Q99MS8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpgs1Q99MS8 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tpgs1Q99MS8 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Tpgs1Q99MS8 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Tpgs1Q99MS8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tpgs1Q99MS8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Tpgs1Q99MS8 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Tpgs1Q99MS8 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Tpgs1Q99MS8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tpgs1Q99MS8 Gm13216-201ENSMUST00000117145 591 ntBASIC17.49■□□□□ 0.39
Tpgs1Q99MS8 Gm25016-201ENSMUST00000158399 131 ntBASIC17.49■□□□□ 0.39
Tpgs1Q99MS8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tpgs1Q99MS8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tpgs1Q99MS8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.49■□□□□ 0.39
Tpgs1Q99MS8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tpgs1Q99MS8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tpgs1Q99MS8 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.49■□□□□ 0.39
Tpgs1Q99MS8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tpgs1Q99MS8 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Tpgs1Q99MS8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tpgs1Q99MS8 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tpgs1Q99MS8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tpgs1Q99MS8 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tpgs1Q99MS8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Tpgs1Q99MS8 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.48■□□□□ 0.39
Tpgs1Q99MS8 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpgs1Q99MS8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpgs1Q99MS8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpgs1Q99MS8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpgs1Q99MS8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpgs1Q99MS8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpgs1Q99MS8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpgs1Q99MS8 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.48■□□□□ 0.39
Tpgs1Q99MS8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Tpgs1Q99MS8 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Tpgs1Q99MS8 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpgs1Q99MS8 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpgs1Q99MS8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.48■□□□□ 0.39
Tpgs1Q99MS8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpgs1Q99MS8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.48■□□□□ 0.39
Tpgs1Q99MS8 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpgs1Q99MS8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpgs1Q99MS8 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpgs1Q99MS8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Tpgs1Q99MS8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpgs1Q99MS8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpgs1Q99MS8 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tpgs1Q99MS8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpgs1Q99MS8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpgs1Q99MS8 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpgs1Q99MS8 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Tpgs1Q99MS8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpgs1Q99MS8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.47■□□□□ 0.39
Tpgs1Q99MS8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms