Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf111Q99ML9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf111Q99ML9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf111Q99ML9 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf111Q99ML9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf111Q99ML9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf111Q99ML9 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf111Q99ML9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Rnf111Q99ML9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rnf111Q99ML9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf111Q99ML9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf111Q99ML9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf111Q99ML9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf111Q99ML9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf111Q99ML9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf111Q99ML9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.31■□□□□ 0.2
Rnf111Q99ML9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf111Q99ML9 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf111Q99ML9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf111Q99ML9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Rnf111Q99ML9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf111Q99ML9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf111Q99ML9 Gm4974-201ENSMUST00000209974 875 ntBASIC16.31■□□□□ 0.2
Rnf111Q99ML9 Gm10812-201ENSMUST00000099864 546 ntBASIC16.31■□□□□ 0.2
Rnf111Q99ML9 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf111Q99ML9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf111Q99ML9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf111Q99ML9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf111Q99ML9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf111Q99ML9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.31■□□□□ 0.2
Rnf111Q99ML9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf111Q99ML9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf111Q99ML9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf111Q99ML9 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf111Q99ML9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf111Q99ML9 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf111Q99ML9 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf111Q99ML9 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf111Q99ML9 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf111Q99ML9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Rnf111Q99ML9 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Rnf111Q99ML9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf111Q99ML9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf111Q99ML9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf111Q99ML9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.3■□□□□ 0.2
Rnf111Q99ML9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Rnf111Q99ML9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Rnf111Q99ML9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.3■□□□□ 0.2
Rnf111Q99ML9 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf111Q99ML9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf111Q99ML9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf111Q99ML9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf111Q99ML9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf111Q99ML9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
Rnf111Q99ML9 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf111Q99ML9 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf111Q99ML9 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf111Q99ML9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf111Q99ML9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf111Q99ML9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Rnf111Q99ML9 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf111Q99ML9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf111Q99ML9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf111Q99ML9 Mir1199-201ENSMUST00000117015 119 ntBASIC16.29■□□□□ 0.2
Rnf111Q99ML9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf111Q99ML9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.29■□□□□ 0.2
Rnf111Q99ML9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf111Q99ML9 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.29■□□□□ 0.2
Rnf111Q99ML9 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.29■□□□□ 0.2
Rnf111Q99ML9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf111Q99ML9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf111Q99ML9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf111Q99ML9 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.29■□□□□ 0.2
Rnf111Q99ML9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf111Q99ML9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf111Q99ML9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf111Q99ML9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf111Q99ML9 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf111Q99ML9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf111Q99ML9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf111Q99ML9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf111Q99ML9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf111Q99ML9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf111Q99ML9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf111Q99ML9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf111Q99ML9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf111Q99ML9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf111Q99ML9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rnf111Q99ML9 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.28■□□□□ 0.2
Rnf111Q99ML9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf111Q99ML9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rnf111Q99ML9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf111Q99ML9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.28■□□□□ 0.2
Rnf111Q99ML9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Rnf111Q99ML9 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf111Q99ML9 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.28■□□□□ 0.2
Rnf111Q99ML9 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.28■□□□□ 0.2
Rnf111Q99ML9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.28■□□□□ 0.2
Rnf111Q99ML9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Rnf111Q99ML9 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms