Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RtcbQ99LF4 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RtcbQ99LF4 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RtcbQ99LF4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.74■□□□□ 0.91
RtcbQ99LF4 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RtcbQ99LF4 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RtcbQ99LF4 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RtcbQ99LF4 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RtcbQ99LF4 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RtcbQ99LF4 CT009713.7-201ENSMUST00000224689 571 ntBASIC20.74■□□□□ 0.91
RtcbQ99LF4 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RtcbQ99LF4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RtcbQ99LF4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RtcbQ99LF4 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RtcbQ99LF4 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RtcbQ99LF4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.73■□□□□ 0.91
RtcbQ99LF4 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RtcbQ99LF4 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RtcbQ99LF4 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RtcbQ99LF4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RtcbQ99LF4 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC20.73■□□□□ 0.91
RtcbQ99LF4 Gm6736-201ENSMUST00000166583 948 ntBASIC20.73■□□□□ 0.91
RtcbQ99LF4 Gm25745-201ENSMUST00000174945 133 ntBASIC20.73■□□□□ 0.91
RtcbQ99LF4 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RtcbQ99LF4 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC20.73■□□□□ 0.91
RtcbQ99LF4 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RtcbQ99LF4 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RtcbQ99LF4 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RtcbQ99LF4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RtcbQ99LF4 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RtcbQ99LF4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RtcbQ99LF4 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RtcbQ99LF4 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RtcbQ99LF4 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RtcbQ99LF4 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RtcbQ99LF4 Gm25990-201ENSMUST00000102440 86 ntBASIC20.72■□□□□ 0.91
RtcbQ99LF4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RtcbQ99LF4 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC20.72■□□□□ 0.91
RtcbQ99LF4 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC20.72■□□□□ 0.91
RtcbQ99LF4 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RtcbQ99LF4 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
RtcbQ99LF4 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RtcbQ99LF4 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
RtcbQ99LF4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RtcbQ99LF4 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RtcbQ99LF4 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC20.71■□□□□ 0.91
RtcbQ99LF4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RtcbQ99LF4 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RtcbQ99LF4 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RtcbQ99LF4 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RtcbQ99LF4 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RtcbQ99LF4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RtcbQ99LF4 Gm7230-201ENSMUST00000173026 815 ntBASIC20.71■□□□□ 0.91
RtcbQ99LF4 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC20.71■□□□□ 0.91
RtcbQ99LF4 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RtcbQ99LF4 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RtcbQ99LF4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RtcbQ99LF4 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RtcbQ99LF4 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RtcbQ99LF4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RtcbQ99LF4 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RtcbQ99LF4 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RtcbQ99LF4 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RtcbQ99LF4 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
RtcbQ99LF4 Gfra2-202ENSMUST00000227633 1480 ntBASIC20.7■□□□□ 0.9
RtcbQ99LF4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC20.7■□□□□ 0.9
RtcbQ99LF4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RtcbQ99LF4 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RtcbQ99LF4 Gm13418-201ENSMUST00000119097 944 ntBASIC20.7■□□□□ 0.9
RtcbQ99LF4 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RtcbQ99LF4 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC20.7■□□□□ 0.9
RtcbQ99LF4 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC20.7■□□□□ 0.9
RtcbQ99LF4 CT943659.1-201ENSMUST00000215459 326 ntBASIC20.7■□□□□ 0.9
RtcbQ99LF4 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC20.7■□□□□ 0.9
RtcbQ99LF4 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RtcbQ99LF4 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RtcbQ99LF4 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.7■□□□□ 0.9
RtcbQ99LF4 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RtcbQ99LF4 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RtcbQ99LF4 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RtcbQ99LF4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RtcbQ99LF4 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RtcbQ99LF4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RtcbQ99LF4 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RtcbQ99LF4 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RtcbQ99LF4 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RtcbQ99LF4 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RtcbQ99LF4 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RtcbQ99LF4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
RtcbQ99LF4 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RtcbQ99LF4 Gm4535-201ENSMUST00000182274 558 ntBASIC20.69■□□□□ 0.9
RtcbQ99LF4 Gm43575-201ENSMUST00000196420 516 ntBASIC20.69■□□□□ 0.9
RtcbQ99LF4 Gm42670-201ENSMUST00000201816 1292 ntBASIC20.69■□□□□ 0.9
RtcbQ99LF4 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RtcbQ99LF4 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RtcbQ99LF4 Gm10355-201ENSMUST00000097146 517 ntBASIC20.69■□□□□ 0.9
RtcbQ99LF4 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RtcbQ99LF4 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RtcbQ99LF4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RtcbQ99LF4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms