Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cstf1Q99LC2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cstf1Q99LC2 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cstf1Q99LC2 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Cstf1Q99LC2 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.76■□□□□ 0.27
Cstf1Q99LC2 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cstf1Q99LC2 Gm6376-201ENSMUST00000209407 580 ntBASIC16.76■□□□□ 0.27
Cstf1Q99LC2 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.76■□□□□ 0.27
Cstf1Q99LC2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cstf1Q99LC2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cstf1Q99LC2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cstf1Q99LC2 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.76■□□□□ 0.27
Cstf1Q99LC2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cstf1Q99LC2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cstf1Q99LC2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.75■□□□□ 0.27
Cstf1Q99LC2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cstf1Q99LC2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cstf1Q99LC2 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cstf1Q99LC2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cstf1Q99LC2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cstf1Q99LC2 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.75■□□□□ 0.27
Cstf1Q99LC2 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.75■□□□□ 0.27
Cstf1Q99LC2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cstf1Q99LC2 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cstf1Q99LC2 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
Cstf1Q99LC2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cstf1Q99LC2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cstf1Q99LC2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cstf1Q99LC2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cstf1Q99LC2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cstf1Q99LC2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cstf1Q99LC2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cstf1Q99LC2 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cstf1Q99LC2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.74■□□□□ 0.27
Cstf1Q99LC2 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cstf1Q99LC2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cstf1Q99LC2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cstf1Q99LC2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cstf1Q99LC2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cstf1Q99LC2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cstf1Q99LC2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cstf1Q99LC2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cstf1Q99LC2 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.74■□□□□ 0.27
Cstf1Q99LC2 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.74■□□□□ 0.27
Cstf1Q99LC2 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cstf1Q99LC2 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cstf1Q99LC2 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cstf1Q99LC2 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cstf1Q99LC2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cstf1Q99LC2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Cstf1Q99LC2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cstf1Q99LC2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cstf1Q99LC2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cstf1Q99LC2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cstf1Q99LC2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cstf1Q99LC2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.73■□□□□ 0.27
Cstf1Q99LC2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cstf1Q99LC2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cstf1Q99LC2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cstf1Q99LC2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.73■□□□□ 0.27
Cstf1Q99LC2 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cstf1Q99LC2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cstf1Q99LC2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cstf1Q99LC2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cstf1Q99LC2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Cstf1Q99LC2 Mir5131-201ENSMUST00000175426 93 ntBASIC16.73■□□□□ 0.27
Cstf1Q99LC2 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cstf1Q99LC2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cstf1Q99LC2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cstf1Q99LC2 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Cstf1Q99LC2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cstf1Q99LC2 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cstf1Q99LC2 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cstf1Q99LC2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cstf1Q99LC2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cstf1Q99LC2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cstf1Q99LC2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cstf1Q99LC2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cstf1Q99LC2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cstf1Q99LC2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.73■□□□□ 0.27
Cstf1Q99LC2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cstf1Q99LC2 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.72■□□□□ 0.27
Cstf1Q99LC2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Cstf1Q99LC2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cstf1Q99LC2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cstf1Q99LC2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.72■□□□□ 0.27
Cstf1Q99LC2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cstf1Q99LC2 Gm7862-201ENSMUST00000121461 292 ntBASIC16.72■□□□□ 0.27
Cstf1Q99LC2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cstf1Q99LC2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cstf1Q99LC2 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.72■□□□□ 0.27
Cstf1Q99LC2 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.72■□□□□ 0.27
Cstf1Q99LC2 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.72■□□□□ 0.27
Cstf1Q99LC2 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cstf1Q99LC2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cstf1Q99LC2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cstf1Q99LC2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cstf1Q99LC2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cstf1Q99LC2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Cstf1Q99LC2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms