Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcd2Q99JR8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcd2Q99JR8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Smarcd2Q99JR8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcd2Q99JR8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcd2Q99JR8 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcd2Q99JR8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcd2Q99JR8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcd2Q99JR8 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Smarcd2Q99JR8 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.96■□□□□ 0.31
Smarcd2Q99JR8 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcd2Q99JR8 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Smarcd2Q99JR8 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcd2Q99JR8 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcd2Q99JR8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcd2Q99JR8 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Smarcd2Q99JR8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcd2Q99JR8 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Smarcd2Q99JR8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Smarcd2Q99JR8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Smarcd2Q99JR8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.95■□□□□ 0.3
Smarcd2Q99JR8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcd2Q99JR8 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Smarcd2Q99JR8 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.95■□□□□ 0.3
Smarcd2Q99JR8 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcd2Q99JR8 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.95■□□□□ 0.3
Smarcd2Q99JR8 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.95■□□□□ 0.3
Smarcd2Q99JR8 Gm44430-201ENSMUST00000203376 995 ntBASIC16.95■□□□□ 0.3
Smarcd2Q99JR8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcd2Q99JR8 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.95■□□□□ 0.3
Smarcd2Q99JR8 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.95■□□□□ 0.3
Smarcd2Q99JR8 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Smarcd2Q99JR8 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
Smarcd2Q99JR8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcd2Q99JR8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcd2Q99JR8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcd2Q99JR8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.95■□□□□ 0.3
Smarcd2Q99JR8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcd2Q99JR8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd2Q99JR8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd2Q99JR8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd2Q99JR8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd2Q99JR8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd2Q99JR8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd2Q99JR8 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.94■□□□□ 0.3
Smarcd2Q99JR8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.94■□□□□ 0.3
Smarcd2Q99JR8 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd2Q99JR8 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd2Q99JR8 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.94■□□□□ 0.3
Smarcd2Q99JR8 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.94■□□□□ 0.3
Smarcd2Q99JR8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd2Q99JR8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd2Q99JR8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd2Q99JR8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd2Q99JR8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd2Q99JR8 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.94■□□□□ 0.3
Smarcd2Q99JR8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd2Q99JR8 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Smarcd2Q99JR8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd2Q99JR8 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd2Q99JR8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd2Q99JR8 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd2Q99JR8 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.93■□□□□ 0.3
Smarcd2Q99JR8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd2Q99JR8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd2Q99JR8 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd2Q99JR8 Gm15165-201ENSMUST00000118140 502 ntBASIC16.93■□□□□ 0.3
Smarcd2Q99JR8 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd2Q99JR8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.93■□□□□ 0.3
Smarcd2Q99JR8 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.93■□□□□ 0.3
Smarcd2Q99JR8 Gm44454-201ENSMUST00000198541 138 ntBASIC16.93■□□□□ 0.3
Smarcd2Q99JR8 Gm8969-201ENSMUST00000199694 526 ntBASIC16.93■□□□□ 0.3
Smarcd2Q99JR8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd2Q99JR8 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.93■□□□□ 0.3
Smarcd2Q99JR8 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.93■□□□□ 0.3
Smarcd2Q99JR8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd2Q99JR8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd2Q99JR8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd2Q99JR8 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd2Q99JR8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd2Q99JR8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Smarcd2Q99JR8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd2Q99JR8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Smarcd2Q99JR8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd2Q99JR8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd2Q99JR8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd2Q99JR8 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd2Q99JR8 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd2Q99JR8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd2Q99JR8 Gm27867-201ENSMUST00000184778 125 ntBASIC16.92■□□□□ 0.3
Smarcd2Q99JR8 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.92■□□□□ 0.3
Smarcd2Q99JR8 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd2Q99JR8 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd2Q99JR8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd2Q99JR8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd2Q99JR8 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd2Q99JR8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Smarcd2Q99JR8 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd2Q99JR8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd2Q99JR8 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms