Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Gm12918-201ENSMUST00000120234 636 ntBASIC16.97■□□□□ 0.31
Cdk9Q99J95 Gm15710-201ENSMUST00000121821 636 ntBASIC16.97■□□□□ 0.31
Cdk9Q99J95 Gm5075-201ENSMUST00000196916 622 ntBASIC16.97■□□□□ 0.31
Cdk9Q99J95 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk9Q99J95 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk9Q99J95 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.97■□□□□ 0.31
Cdk9Q99J95 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.97■□□□□ 0.31
Cdk9Q99J95 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk9Q99J95 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Cdk9Q99J95 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk9Q99J95 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.97■□□□□ 0.31
Cdk9Q99J95 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk9Q99J95 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk9Q99J95 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk9Q99J95 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Cdk9Q99J95 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk9Q99J95 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk9Q99J95 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk9Q99J95 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk9Q99J95 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk9Q99J95 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.97■□□□□ 0.31
Cdk9Q99J95 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdk9Q99J95 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdk9Q99J95 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdk9Q99J95 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.96■□□□□ 0.31
Cdk9Q99J95 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdk9Q99J95 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdk9Q99J95 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Cdk9Q99J95 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cdk9Q99J95 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.96■□□□□ 0.31
Cdk9Q99J95 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdk9Q99J95 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdk9Q99J95 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cdk9Q99J95 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.96■□□□□ 0.31
Cdk9Q99J95 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cdk9Q99J95 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Cdk9Q99J95 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdk9Q99J95 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk9Q99J95 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk9Q99J95 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk9Q99J95 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk9Q99J95 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk9Q99J95 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk9Q99J95 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Cdk9Q99J95 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.95■□□□□ 0.3
Cdk9Q99J95 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk9Q99J95 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk9Q99J95 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk9Q99J95 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Cdk9Q99J95 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk9Q99J95 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Cdk9Q99J95 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk9Q99J95 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk9Q99J95 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Cdk9Q99J95 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk9Q99J95 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.95■□□□□ 0.3
Cdk9Q99J95 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk9Q99J95 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Cdk9Q99J95 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk9Q99J95 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk9Q99J95 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.95■□□□□ 0.3
Cdk9Q99J95 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk9Q99J95 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
Cdk9Q99J95 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Cdk9Q99J95 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Cdk9Q99J95 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Cdk9Q99J95 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk9Q99J95 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Cdk9Q99J95 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk9Q99J95 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.94■□□□□ 0.3
Cdk9Q99J95 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Cdk9Q99J95 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk9Q99J95 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.94■□□□□ 0.3
Cdk9Q99J95 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.94■□□□□ 0.3
Cdk9Q99J95 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk9Q99J95 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk9Q99J95 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk9Q99J95 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk9Q99J95 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk9Q99J95 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk9Q99J95 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk9Q99J95 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk9Q99J95 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk9Q99J95 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk9Q99J95 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk9Q99J95 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Cdk9Q99J95 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk9Q99J95 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.93■□□□□ 0.3
Cdk9Q99J95 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.93■□□□□ 0.3
Cdk9Q99J95 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk9Q99J95 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk9Q99J95 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk9Q99J95 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.93■□□□□ 0.3
Cdk9Q99J95 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.93■□□□□ 0.3
Cdk9Q99J95 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk9Q99J95 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.93■□□□□ 0.3
Cdk9Q99J95 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.93■□□□□ 0.3
Cdk9Q99J95 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk9Q99J95 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk9Q99J95 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms