Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col20a1Q923P0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Col20a1Q923P0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
Col20a1Q923P0 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col20a1Q923P0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col20a1Q923P0 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Col20a1Q923P0 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.83■□□□□ 0.76
Col20a1Q923P0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col20a1Q923P0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col20a1Q923P0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col20a1Q923P0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col20a1Q923P0 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col20a1Q923P0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Col20a1Q923P0 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Col20a1Q923P0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.82■□□□□ 0.76
Col20a1Q923P0 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col20a1Q923P0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Col20a1Q923P0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Col20a1Q923P0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col20a1Q923P0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col20a1Q923P0 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Col20a1Q923P0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col20a1Q923P0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Col20a1Q923P0 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col20a1Q923P0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col20a1Q923P0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col20a1Q923P0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col20a1Q923P0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col20a1Q923P0 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col20a1Q923P0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col20a1Q923P0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col20a1Q923P0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.81■□□□□ 0.76
Col20a1Q923P0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col20a1Q923P0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col20a1Q923P0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col20a1Q923P0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.81■□□□□ 0.76
Col20a1Q923P0 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.81■□□□□ 0.76
Col20a1Q923P0 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col20a1Q923P0 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.81■□□□□ 0.76
Col20a1Q923P0 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.81■□□□□ 0.76
Col20a1Q923P0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Col20a1Q923P0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.81■□□□□ 0.76
Col20a1Q923P0 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col20a1Q923P0 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col20a1Q923P0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.81■□□□□ 0.76
Col20a1Q923P0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col20a1Q923P0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col20a1Q923P0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col20a1Q923P0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col20a1Q923P0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col20a1Q923P0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col20a1Q923P0 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col20a1Q923P0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Col20a1Q923P0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col20a1Q923P0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col20a1Q923P0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col20a1Q923P0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col20a1Q923P0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col20a1Q923P0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Col20a1Q923P0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Col20a1Q923P0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col20a1Q923P0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col20a1Q923P0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.81■□□□□ 0.76
Col20a1Q923P0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.8■□□□□ 0.76
Col20a1Q923P0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col20a1Q923P0 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col20a1Q923P0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.8■□□□□ 0.76
Col20a1Q923P0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.8■□□□□ 0.76
Col20a1Q923P0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.8■□□□□ 0.76
Col20a1Q923P0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col20a1Q923P0 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col20a1Q923P0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col20a1Q923P0 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col20a1Q923P0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col20a1Q923P0 Gm7153-201ENSMUST00000117092 455 ntBASIC19.79■□□□□ 0.76
Col20a1Q923P0 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col20a1Q923P0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.79■□□□□ 0.76
Col20a1Q923P0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.79■□□□□ 0.76
Col20a1Q923P0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col20a1Q923P0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col20a1Q923P0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col20a1Q923P0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col20a1Q923P0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Col20a1Q923P0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col20a1Q923P0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col20a1Q923P0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col20a1Q923P0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col20a1Q923P0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.79■□□□□ 0.76
Col20a1Q923P0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.79■□□□□ 0.76
Col20a1Q923P0 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col20a1Q923P0 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col20a1Q923P0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col20a1Q923P0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col20a1Q923P0 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.78■□□□□ 0.76
Col20a1Q923P0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Col20a1Q923P0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.78■□□□□ 0.76
Col20a1Q923P0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.78■□□□□ 0.76
Col20a1Q923P0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Col20a1Q923P0 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col20a1Q923P0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms