Protein–RNA interactions for Protein: Q921V7

Slc44a3, Choline transporter-like protein 3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a3Q921V7 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc44a3Q921V7 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc44a3Q921V7 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc44a3Q921V7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Slc44a3Q921V7 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc44a3Q921V7 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.6■□□□□ 0.25
Slc44a3Q921V7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc44a3Q921V7 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Slc44a3Q921V7 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Slc44a3Q921V7 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Slc44a3Q921V7 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Slc44a3Q921V7 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.6■□□□□ 0.25
Slc44a3Q921V7 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Slc44a3Q921V7 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc44a3Q921V7 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc44a3Q921V7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc44a3Q921V7 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc44a3Q921V7 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc44a3Q921V7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Slc44a3Q921V7 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc44a3Q921V7 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc44a3Q921V7 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Slc44a3Q921V7 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc44a3Q921V7 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc44a3Q921V7 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc44a3Q921V7 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc44a3Q921V7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Slc44a3Q921V7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc44a3Q921V7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc44a3Q921V7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc44a3Q921V7 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc44a3Q921V7 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Slc44a3Q921V7 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc44a3Q921V7 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc44a3Q921V7 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Slc44a3Q921V7 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Slc44a3Q921V7 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Slc44a3Q921V7 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc44a3Q921V7 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc44a3Q921V7 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Slc44a3Q921V7 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc44a3Q921V7 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Slc44a3Q921V7 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc44a3Q921V7 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc44a3Q921V7 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc44a3Q921V7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc44a3Q921V7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Slc44a3Q921V7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Slc44a3Q921V7 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Slc44a3Q921V7 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Slc44a3Q921V7 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc44a3Q921V7 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Slc44a3Q921V7 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc44a3Q921V7 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Slc44a3Q921V7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.58■□□□□ 0.24
Slc44a3Q921V7 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc44a3Q921V7 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.58■□□□□ 0.24
Slc44a3Q921V7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.58■□□□□ 0.24
Slc44a3Q921V7 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Slc44a3Q921V7 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Slc44a3Q921V7 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc44a3Q921V7 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc44a3Q921V7 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.58■□□□□ 0.24
Slc44a3Q921V7 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc44a3Q921V7 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc44a3Q921V7 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.58■□□□□ 0.24
Slc44a3Q921V7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc44a3Q921V7 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc44a3Q921V7 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.58■□□□□ 0.24
Slc44a3Q921V7 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc44a3Q921V7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.58■□□□□ 0.24
Slc44a3Q921V7 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc44a3Q921V7 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Slc44a3Q921V7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc44a3Q921V7 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Slc44a3Q921V7 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc44a3Q921V7 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.57■□□□□ 0.24
Slc44a3Q921V7 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc44a3Q921V7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc44a3Q921V7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Slc44a3Q921V7 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc44a3Q921V7 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc44a3Q921V7 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.57■□□□□ 0.24
Slc44a3Q921V7 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.57■□□□□ 0.24
Slc44a3Q921V7 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc44a3Q921V7 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc44a3Q921V7 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc44a3Q921V7 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc44a3Q921V7 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.57■□□□□ 0.24
Slc44a3Q921V7 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Slc44a3Q921V7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc44a3Q921V7 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc44a3Q921V7 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc44a3Q921V7 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc44a3Q921V7 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc44a3Q921V7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Slc44a3Q921V7 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc44a3Q921V7 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc44a3Q921V7 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Slc44a3Q921V7 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms