Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sf3b3Q921M3 Gm7862-201ENSMUST00000121461 292 ntBASIC20.2■□□□□ 0.82
Sf3b3Q921M3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
Sf3b3Q921M3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC20.2■□□□□ 0.82
Sf3b3Q921M3 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC20.2■□□□□ 0.82
Sf3b3Q921M3 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC20.2■□□□□ 0.82
Sf3b3Q921M3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC20.2■□□□□ 0.82
Sf3b3Q921M3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sf3b3Q921M3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.2■□□□□ 0.82
Sf3b3Q921M3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sf3b3Q921M3 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sf3b3Q921M3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sf3b3Q921M3 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sf3b3Q921M3 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sf3b3Q921M3 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sf3b3Q921M3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.19■□□□□ 0.82
Sf3b3Q921M3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sf3b3Q921M3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sf3b3Q921M3 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sf3b3Q921M3 Gm44357-201ENSMUST00000195897 142 ntBASIC20.19■□□□□ 0.82
Sf3b3Q921M3 Gm19658-201ENSMUST00000196231 138 ntBASIC20.19■□□□□ 0.82
Sf3b3Q921M3 Gm44367-201ENSMUST00000196836 138 ntBASIC20.19■□□□□ 0.82
Sf3b3Q921M3 Gm44350-201ENSMUST00000197197 138 ntBASIC20.19■□□□□ 0.82
Sf3b3Q921M3 Gm44390-201ENSMUST00000197533 144 ntBASIC20.19■□□□□ 0.82
Sf3b3Q921M3 Gm44313-201ENSMUST00000198018 138 ntBASIC20.19■□□□□ 0.82
Sf3b3Q921M3 Gm44486-201ENSMUST00000198508 138 ntBASIC20.19■□□□□ 0.82
Sf3b3Q921M3 Gm44314-201ENSMUST00000199263 138 ntBASIC20.19■□□□□ 0.82
Sf3b3Q921M3 Gm44394-201ENSMUST00000199558 138 ntBASIC20.19■□□□□ 0.82
Sf3b3Q921M3 Gm44484-201ENSMUST00000199873 138 ntBASIC20.19■□□□□ 0.82
Sf3b3Q921M3 Gm44466-201ENSMUST00000200264 138 ntBASIC20.19■□□□□ 0.82
Sf3b3Q921M3 Gm44359-201ENSMUST00000200671 138 ntBASIC20.19■□□□□ 0.82
Sf3b3Q921M3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sf3b3Q921M3 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC20.19■□□□□ 0.82
Sf3b3Q921M3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sf3b3Q921M3 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sf3b3Q921M3 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sf3b3Q921M3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sf3b3Q921M3 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sf3b3Q921M3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sf3b3Q921M3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sf3b3Q921M3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sf3b3Q921M3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sf3b3Q921M3 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sf3b3Q921M3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sf3b3Q921M3 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.18■□□□□ 0.82
Sf3b3Q921M3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Sf3b3Q921M3 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sf3b3Q921M3 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sf3b3Q921M3 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Sf3b3Q921M3 Gm6376-201ENSMUST00000209407 580 ntBASIC20.18■□□□□ 0.82
Sf3b3Q921M3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Sf3b3Q921M3 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Sf3b3Q921M3 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sf3b3Q921M3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sf3b3Q921M3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sf3b3Q921M3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sf3b3Q921M3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sf3b3Q921M3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sf3b3Q921M3 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sf3b3Q921M3 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sf3b3Q921M3 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC20.17■□□□□ 0.82
Sf3b3Q921M3 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC20.17■□□□□ 0.82
Sf3b3Q921M3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sf3b3Q921M3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sf3b3Q921M3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sf3b3Q921M3 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.17■□□□□ 0.82
Sf3b3Q921M3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Sf3b3Q921M3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sf3b3Q921M3 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sf3b3Q921M3 CT009713.7-201ENSMUST00000224689 571 ntBASIC20.16■□□□□ 0.82
Sf3b3Q921M3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sf3b3Q921M3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sf3b3Q921M3 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Sf3b3Q921M3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sf3b3Q921M3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sf3b3Q921M3 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sf3b3Q921M3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Sf3b3Q921M3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sf3b3Q921M3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sf3b3Q921M3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sf3b3Q921M3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sf3b3Q921M3 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sf3b3Q921M3 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sf3b3Q921M3 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sf3b3Q921M3 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sf3b3Q921M3 Gm2651-201ENSMUST00000203560 838 ntBASIC20.15■□□□□ 0.82
Sf3b3Q921M3 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sf3b3Q921M3 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sf3b3Q921M3 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sf3b3Q921M3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sf3b3Q921M3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.15■□□□□ 0.82
Sf3b3Q921M3 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sf3b3Q921M3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sf3b3Q921M3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Sf3b3Q921M3 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sf3b3Q921M3 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sf3b3Q921M3 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Sf3b3Q921M3 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC20.14■□□□□ 0.81
Sf3b3Q921M3 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Sf3b3Q921M3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms