Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Gm9013-201ENSMUST00000132939 882 ntBASIC17.69■□□□□ 0.42
Pcdha11Q91Y19 Gm6345-202ENSMUST00000180900 204 ntBASIC17.69■□□□□ 0.42
Pcdha11Q91Y19 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha11Q91Y19 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha11Q91Y19 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Pcdha11Q91Y19 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha11Q91Y19 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha11Q91Y19 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha11Q91Y19 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha11Q91Y19 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha11Q91Y19 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha11Q91Y19 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha11Q91Y19 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha11Q91Y19 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Pcdha11Q91Y19 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha11Q91Y19 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha11Q91Y19 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdha11Q91Y19 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Pcdha11Q91Y19 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdha11Q91Y19 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdha11Q91Y19 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdha11Q91Y19 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha11Q91Y19 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha11Q91Y19 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha11Q91Y19 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha11Q91Y19 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha11Q91Y19 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha11Q91Y19 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha11Q91Y19 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha11Q91Y19 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha11Q91Y19 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha11Q91Y19 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Pcdha11Q91Y19 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Pcdha11Q91Y19 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.68■□□□□ 0.42
Pcdha11Q91Y19 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.68■□□□□ 0.42
Pcdha11Q91Y19 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha11Q91Y19 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha11Q91Y19 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha11Q91Y19 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha11Q91Y19 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha11Q91Y19 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha11Q91Y19 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha11Q91Y19 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha11Q91Y19 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Pcdha11Q91Y19 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Pcdha11Q91Y19 Gm5587-201ENSMUST00000206270 674 ntBASIC17.67■□□□□ 0.42
Pcdha11Q91Y19 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha11Q91Y19 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha11Q91Y19 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha11Q91Y19 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Pcdha11Q91Y19 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha11Q91Y19 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha11Q91Y19 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Pcdha11Q91Y19 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha11Q91Y19 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha11Q91Y19 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha11Q91Y19 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha11Q91Y19 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pcdha11Q91Y19 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha11Q91Y19 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha11Q91Y19 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha11Q91Y19 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha11Q91Y19 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Pcdha11Q91Y19 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.66■□□□□ 0.42
Pcdha11Q91Y19 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Pcdha11Q91Y19 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha11Q91Y19 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha11Q91Y19 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha11Q91Y19 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha11Q91Y19 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha11Q91Y19 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Pcdha11Q91Y19 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha11Q91Y19 Gm13186-201ENSMUST00000118031 316 ntBASIC17.66■□□□□ 0.42
Pcdha11Q91Y19 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdha11Q91Y19 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.66■□□□□ 0.42
Pcdha11Q91Y19 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Pcdha11Q91Y19 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha11Q91Y19 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha11Q91Y19 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha11Q91Y19 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha11Q91Y19 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha11Q91Y19 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha11Q91Y19 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha11Q91Y19 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha11Q91Y19 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdha11Q91Y19 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdha11Q91Y19 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdha11Q91Y19 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Pcdha11Q91Y19 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdha11Q91Y19 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdha11Q91Y19 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdha11Q91Y19 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdha11Q91Y19 Gm37722-201ENSMUST00000193757 208 ntBASIC17.65■□□□□ 0.42
Pcdha11Q91Y19 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdha11Q91Y19 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdha11Q91Y19 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Pcdha11Q91Y19 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdha11Q91Y19 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdha11Q91Y19 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdha11Q91Y19 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms