Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC16.23■□□□□ 0.19
Pcdhb20Q91XZ9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.23■□□□□ 0.19
Pcdhb20Q91XZ9 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb20Q91XZ9 AC140209.1-201ENSMUST00000227875 284 ntBASIC16.23■□□□□ 0.19
Pcdhb20Q91XZ9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb20Q91XZ9 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhb20Q91XZ9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb20Q91XZ9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb20Q91XZ9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb20Q91XZ9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhb20Q91XZ9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb20Q91XZ9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb20Q91XZ9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb20Q91XZ9 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb20Q91XZ9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb20Q91XZ9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb20Q91XZ9 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb20Q91XZ9 Gm29644-201ENSMUST00000189003 1341 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Pcdhb20Q91XZ9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb20Q91XZ9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb20Q91XZ9 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb20Q91XZ9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.22■□□□□ 0.19
Pcdhb20Q91XZ9 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb20Q91XZ9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb20Q91XZ9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb20Q91XZ9 Gm21147-201ENSMUST00000186046 913 ntBASIC16.22■□□□□ 0.19
Pcdhb20Q91XZ9 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb20Q91XZ9 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.22■□□□□ 0.19
Pcdhb20Q91XZ9 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb20Q91XZ9 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Pcdhb20Q91XZ9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Pcdhb20Q91XZ9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb20Q91XZ9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb20Q91XZ9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.21■□□□□ 0.19
Pcdhb20Q91XZ9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb20Q91XZ9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb20Q91XZ9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb20Q91XZ9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb20Q91XZ9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb20Q91XZ9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb20Q91XZ9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb20Q91XZ9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb20Q91XZ9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Pcdhb20Q91XZ9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Pcdhb20Q91XZ9 Gm11355-201ENSMUST00000121120 306 ntBASIC16.21■□□□□ 0.19
Pcdhb20Q91XZ9 Gm9013-201ENSMUST00000132939 882 ntBASIC16.21■□□□□ 0.19
Pcdhb20Q91XZ9 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb20Q91XZ9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb20Q91XZ9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Pcdhb20Q91XZ9 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Pcdhb20Q91XZ9 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb20Q91XZ9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb20Q91XZ9 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb20Q91XZ9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb20Q91XZ9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb20Q91XZ9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Pcdhb20Q91XZ9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb20Q91XZ9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhb20Q91XZ9 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb20Q91XZ9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb20Q91XZ9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb20Q91XZ9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdhb20Q91XZ9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.2■□□□□ 0.18
Pcdhb20Q91XZ9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb20Q91XZ9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhb20Q91XZ9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb20Q91XZ9 Gm14740-201ENSMUST00000118538 1150 ntBASIC16.2■□□□□ 0.18
Pcdhb20Q91XZ9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.2■□□□□ 0.18
Pcdhb20Q91XZ9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhb20Q91XZ9 Gm18377-201ENSMUST00000215141 607 ntBASIC16.2■□□□□ 0.18
Pcdhb20Q91XZ9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb20Q91XZ9 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb20Q91XZ9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdhb20Q91XZ9 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.2■□□□□ 0.18
Pcdhb20Q91XZ9 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb20Q91XZ9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb20Q91XZ9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb20Q91XZ9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb20Q91XZ9 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb20Q91XZ9 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb20Q91XZ9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Pcdhb20Q91XZ9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb20Q91XZ9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhb20Q91XZ9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb20Q91XZ9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb20Q91XZ9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhb20Q91XZ9 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC16.19■□□□□ 0.18
Pcdhb20Q91XZ9 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb20Q91XZ9 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb20Q91XZ9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb20Q91XZ9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb20Q91XZ9 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb20Q91XZ9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.19■□□□□ 0.18
Pcdhb20Q91XZ9 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.19■□□□□ 0.18
Pcdhb20Q91XZ9 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb20Q91XZ9 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb20Q91XZ9 Gm10566-201ENSMUST00000086739 996 ntBASIC16.19■□□□□ 0.18
Pcdhb20Q91XZ9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb20Q91XZ9 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.19■□□□□ 0.18
Pcdhb20Q91XZ9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms