Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb3Q91XZ7 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb3Q91XZ7 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb3Q91XZ7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb3Q91XZ7 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdhb3Q91XZ7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb3Q91XZ7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb3Q91XZ7 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb3Q91XZ7 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb3Q91XZ7 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb3Q91XZ7 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb3Q91XZ7 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb3Q91XZ7 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb3Q91XZ7 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb3Q91XZ7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb3Q91XZ7 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb3Q91XZ7 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb3Q91XZ7 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb3Q91XZ7 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb3Q91XZ7 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb3Q91XZ7 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb3Q91XZ7 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb3Q91XZ7 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb3Q91XZ7 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb3Q91XZ7 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb3Q91XZ7 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdhb3Q91XZ7 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhb3Q91XZ7 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb3Q91XZ7 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb3Q91XZ7 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhb3Q91XZ7 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb3Q91XZ7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb3Q91XZ7 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb3Q91XZ7 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhb3Q91XZ7 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhb3Q91XZ7 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb3Q91XZ7 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb3Q91XZ7 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb3Q91XZ7 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb3Q91XZ7 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhb3Q91XZ7 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb3Q91XZ7 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb3Q91XZ7 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb3Q91XZ7 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb3Q91XZ7 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb3Q91XZ7 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhb3Q91XZ7 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb3Q91XZ7 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb3Q91XZ7 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Pcdhb3Q91XZ7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb3Q91XZ7 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhb3Q91XZ7 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb3Q91XZ7 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb3Q91XZ7 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb3Q91XZ7 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb3Q91XZ7 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb3Q91XZ7 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Pcdhb3Q91XZ7 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb3Q91XZ7 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb3Q91XZ7 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb3Q91XZ7 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb3Q91XZ7 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb3Q91XZ7 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb3Q91XZ7 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb3Q91XZ7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb3Q91XZ7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhb3Q91XZ7 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb3Q91XZ7 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb3Q91XZ7 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdhb3Q91XZ7 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb3Q91XZ7 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb3Q91XZ7 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhb3Q91XZ7 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb3Q91XZ7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb3Q91XZ7 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.79■□□□□ 0.28
Pcdhb3Q91XZ7 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb3Q91XZ7 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb3Q91XZ7 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb3Q91XZ7 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb3Q91XZ7 Gm13323-201ENSMUST00000120245 1151 ntBASIC16.79■□□□□ 0.28
Pcdhb3Q91XZ7 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb3Q91XZ7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhb3Q91XZ7 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb3Q91XZ7 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdhb3Q91XZ7 AC073947.1-201ENSMUST00000216991 649 ntBASIC16.79■□□□□ 0.28
Pcdhb3Q91XZ7 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb3Q91XZ7 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhb3Q91XZ7 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb3Q91XZ7 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb3Q91XZ7 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb3Q91XZ7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhb3Q91XZ7 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhb3Q91XZ7 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb3Q91XZ7 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb3Q91XZ7 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb3Q91XZ7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb3Q91XZ7 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb3Q91XZ7 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhb3Q91XZ7 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb3Q91XZ7 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms