Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Gm15372-201ENSMUST00000120729 834 ntBASIC19.8■□□□□ 0.76
Pcdhb5Q91XZ5 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.8■□□□□ 0.76
Pcdhb5Q91XZ5 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.8■□□□□ 0.76
Pcdhb5Q91XZ5 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.8■□□□□ 0.76
Pcdhb5Q91XZ5 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Pcdhb5Q91XZ5 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.8■□□□□ 0.76
Pcdhb5Q91XZ5 Mir8098-201ENSMUST00000184011 137 ntBASIC19.8■□□□□ 0.76
Pcdhb5Q91XZ5 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.8■□□□□ 0.76
Pcdhb5Q91XZ5 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb5Q91XZ5 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.8■□□□□ 0.76
Pcdhb5Q91XZ5 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Pcdhb5Q91XZ5 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Pcdhb5Q91XZ5 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb5Q91XZ5 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb5Q91XZ5 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb5Q91XZ5 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb5Q91XZ5 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb5Q91XZ5 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb5Q91XZ5 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb5Q91XZ5 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb5Q91XZ5 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb5Q91XZ5 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Pcdhb5Q91XZ5 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.79■□□□□ 0.76
Pcdhb5Q91XZ5 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb5Q91XZ5 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb5Q91XZ5 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb5Q91XZ5 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb5Q91XZ5 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Pcdhb5Q91XZ5 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb5Q91XZ5 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb5Q91XZ5 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb5Q91XZ5 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb5Q91XZ5 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb5Q91XZ5 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb5Q91XZ5 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb5Q91XZ5 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb5Q91XZ5 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb5Q91XZ5 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb5Q91XZ5 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb5Q91XZ5 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Pcdhb5Q91XZ5 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb5Q91XZ5 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb5Q91XZ5 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb5Q91XZ5 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.77■□□□□ 0.76
Pcdhb5Q91XZ5 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Pcdhb5Q91XZ5 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.77■□□□□ 0.76
Pcdhb5Q91XZ5 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.77■□□□□ 0.76
Pcdhb5Q91XZ5 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb5Q91XZ5 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Pcdhb5Q91XZ5 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb5Q91XZ5 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb5Q91XZ5 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pcdhb5Q91XZ5 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb5Q91XZ5 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb5Q91XZ5 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb5Q91XZ5 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb5Q91XZ5 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb5Q91XZ5 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.76■□□□□ 0.75
Pcdhb5Q91XZ5 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb5Q91XZ5 Gm13884-201ENSMUST00000118103 829 ntBASIC19.76■□□□□ 0.75
Pcdhb5Q91XZ5 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC19.76■□□□□ 0.75
Pcdhb5Q91XZ5 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.76■□□□□ 0.75
Pcdhb5Q91XZ5 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb5Q91XZ5 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb5Q91XZ5 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb5Q91XZ5 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb5Q91XZ5 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.76■□□□□ 0.75
Pcdhb5Q91XZ5 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb5Q91XZ5 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.76■□□□□ 0.75
Pcdhb5Q91XZ5 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb5Q91XZ5 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb5Q91XZ5 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb5Q91XZ5 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Pcdhb5Q91XZ5 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb5Q91XZ5 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.75■□□□□ 0.75
Pcdhb5Q91XZ5 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.75■□□□□ 0.75
Pcdhb5Q91XZ5 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb5Q91XZ5 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.75■□□□□ 0.75
Pcdhb5Q91XZ5 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Pcdhb5Q91XZ5 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb5Q91XZ5 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.75■□□□□ 0.75
Pcdhb5Q91XZ5 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb5Q91XZ5 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb5Q91XZ5 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb5Q91XZ5 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb5Q91XZ5 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Pcdhb5Q91XZ5 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb5Q91XZ5 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.74■□□□□ 0.75
Pcdhb5Q91XZ5 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb5Q91XZ5 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Pcdhb5Q91XZ5 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb5Q91XZ5 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb5Q91XZ5 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.74■□□□□ 0.75
Pcdhb5Q91XZ5 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb5Q91XZ5 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.74■□□□□ 0.75
Pcdhb5Q91XZ5 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb5Q91XZ5 Rprl3-201ENSMUST00000157400 290 ntBASIC19.74■□□□□ 0.75
Pcdhb5Q91XZ5 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb5Q91XZ5 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb5Q91XZ5 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms