Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga9Q91XX9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga9Q91XX9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhga9Q91XX9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga9Q91XX9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga9Q91XX9 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhga9Q91XX9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga9Q91XX9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Pcdhga9Q91XX9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Pcdhga9Q91XX9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.64■□□□□ 0.25
Pcdhga9Q91XX9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga9Q91XX9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga9Q91XX9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga9Q91XX9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga9Q91XX9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga9Q91XX9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga9Q91XX9 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga9Q91XX9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga9Q91XX9 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.64■□□□□ 0.25
Pcdhga9Q91XX9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Pcdhga9Q91XX9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Pcdhga9Q91XX9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Pcdhga9Q91XX9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhga9Q91XX9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga9Q91XX9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdhga9Q91XX9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhga9Q91XX9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga9Q91XX9 Gm13474-201ENSMUST00000122466 815 ntBASIC16.63■□□□□ 0.25
Pcdhga9Q91XX9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga9Q91XX9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga9Q91XX9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhga9Q91XX9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga9Q91XX9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga9Q91XX9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga9Q91XX9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga9Q91XX9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga9Q91XX9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhga9Q91XX9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga9Q91XX9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga9Q91XX9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga9Q91XX9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga9Q91XX9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Pcdhga9Q91XX9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
Pcdhga9Q91XX9 AA414768-201ENSMUST00000121924 1257 ntBASIC16.62■□□□□ 0.25
Pcdhga9Q91XX9 Gm16061-201ENSMUST00000122167 857 ntBASIC16.62■□□□□ 0.25
Pcdhga9Q91XX9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.62■□□□□ 0.25
Pcdhga9Q91XX9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga9Q91XX9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.62■□□□□ 0.25
Pcdhga9Q91XX9 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.62■□□□□ 0.25
Pcdhga9Q91XX9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhga9Q91XX9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Pcdhga9Q91XX9 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga9Q91XX9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga9Q91XX9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcdhga9Q91XX9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhga9Q91XX9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga9Q91XX9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga9Q91XX9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhga9Q91XX9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga9Q91XX9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga9Q91XX9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga9Q91XX9 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga9Q91XX9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga9Q91XX9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga9Q91XX9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga9Q91XX9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga9Q91XX9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga9Q91XX9 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga9Q91XX9 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga9Q91XX9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga9Q91XX9 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.61■□□□□ 0.25
Pcdhga9Q91XX9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga9Q91XX9 Gm10819-201ENSMUST00000099988 561 ntBASIC16.61■□□□□ 0.25
Pcdhga9Q91XX9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhga9Q91XX9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhga9Q91XX9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga9Q91XX9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga9Q91XX9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga9Q91XX9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhga9Q91XX9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhga9Q91XX9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.61■□□□□ 0.25
Pcdhga9Q91XX9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdhga9Q91XX9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhga9Q91XX9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhga9Q91XX9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhga9Q91XX9 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhga9Q91XX9 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhga9Q91XX9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhga9Q91XX9 Gm18101-201ENSMUST00000215769 548 ntBASIC16.6■□□□□ 0.25
Pcdhga9Q91XX9 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.6■□□□□ 0.25
Pcdhga9Q91XX9 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhga9Q91XX9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Pcdhga9Q91XX9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhga9Q91XX9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhga9Q91XX9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhga9Q91XX9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhga9Q91XX9 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhga9Q91XX9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Pcdhga9Q91XX9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Pcdhga9Q91XX9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms