Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhgc3Q91XX1 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Pcdhgc3Q91XX1 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.92■□□□□ 0.14
Pcdhgc3Q91XX1 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhgc3Q91XX1 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhgc3Q91XX1 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Pcdhgc3Q91XX1 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.92■□□□□ 0.14
Pcdhgc3Q91XX1 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhgc3Q91XX1 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhgc3Q91XX1 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.92■□□□□ 0.14
Pcdhgc3Q91XX1 Mir2861-201ENSMUST00000175539 82 ntBASIC15.92■□□□□ 0.14
Pcdhgc3Q91XX1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.92■□□□□ 0.14
Pcdhgc3Q91XX1 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhgc3Q91XX1 Gm6365-201ENSMUST00000054711 744 ntBASIC15.92■□□□□ 0.14
Pcdhgc3Q91XX1 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.92■□□□□ 0.14
Pcdhgc3Q91XX1 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhgc3Q91XX1 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Pcdhgc3Q91XX1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhgc3Q91XX1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhgc3Q91XX1 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhgc3Q91XX1 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhgc3Q91XX1 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhgc3Q91XX1 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhgc3Q91XX1 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhgc3Q91XX1 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhgc3Q91XX1 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhgc3Q91XX1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhgc3Q91XX1 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhgc3Q91XX1 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Pcdhgc3Q91XX1 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhgc3Q91XX1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhgc3Q91XX1 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhgc3Q91XX1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhgc3Q91XX1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC15.91■□□□□ 0.14
Pcdhgc3Q91XX1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.91■□□□□ 0.14
Pcdhgc3Q91XX1 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.91■□□□□ 0.14
Pcdhgc3Q91XX1 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhgc3Q91XX1 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhgc3Q91XX1 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhgc3Q91XX1 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhgc3Q91XX1 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhgc3Q91XX1 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhgc3Q91XX1 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhgc3Q91XX1 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhgc3Q91XX1 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhgc3Q91XX1 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Pcdhgc3Q91XX1 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhgc3Q91XX1 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhgc3Q91XX1 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhgc3Q91XX1 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhgc3Q91XX1 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhgc3Q91XX1 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhgc3Q91XX1 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhgc3Q91XX1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Pcdhgc3Q91XX1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.9■□□□□ 0.14
Pcdhgc3Q91XX1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhgc3Q91XX1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.9■□□□□ 0.14
Pcdhgc3Q91XX1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhgc3Q91XX1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhgc3Q91XX1 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Pcdhgc3Q91XX1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhgc3Q91XX1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhgc3Q91XX1 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.89■□□□□ 0.13
Pcdhgc3Q91XX1 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.89■□□□□ 0.13
Pcdhgc3Q91XX1 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.89■□□□□ 0.13
Pcdhgc3Q91XX1 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhgc3Q91XX1 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Pcdhgc3Q91XX1 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhgc3Q91XX1 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhgc3Q91XX1 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhgc3Q91XX1 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhgc3Q91XX1 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhgc3Q91XX1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhgc3Q91XX1 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Pcdhgc3Q91XX1 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhgc3Q91XX1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.89■□□□□ 0.13
Pcdhgc3Q91XX1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Pcdhgc3Q91XX1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhgc3Q91XX1 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.89■□□□□ 0.13
Pcdhgc3Q91XX1 Zfp783-201ENSMUST00000095946 670 ntBASIC15.89■□□□□ 0.13
Pcdhgc3Q91XX1 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhgc3Q91XX1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhgc3Q91XX1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdhgc3Q91XX1 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.89■□□□□ 0.13
Pcdhgc3Q91XX1 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhgc3Q91XX1 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhgc3Q91XX1 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhgc3Q91XX1 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhgc3Q91XX1 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhgc3Q91XX1 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhgc3Q91XX1 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhgc3Q91XX1 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhgc3Q91XX1 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhgc3Q91XX1 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhgc3Q91XX1 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhgc3Q91XX1 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhgc3Q91XX1 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhgc3Q91XX1 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhgc3Q91XX1 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhgc3Q91XX1 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms