Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.12■□□□□ 0.65
Pcdhgc5Q91XW9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhgc5Q91XW9 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhgc5Q91XW9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Pcdhgc5Q91XW9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC19.12■□□□□ 0.65
Pcdhgc5Q91XW9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhgc5Q91XW9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhgc5Q91XW9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhgc5Q91XW9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhgc5Q91XW9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhgc5Q91XW9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhgc5Q91XW9 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhgc5Q91XW9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhgc5Q91XW9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhgc5Q91XW9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhgc5Q91XW9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.11■□□□□ 0.65
Pcdhgc5Q91XW9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhgc5Q91XW9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhgc5Q91XW9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Pcdhgc5Q91XW9 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhgc5Q91XW9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.11■□□□□ 0.65
Pcdhgc5Q91XW9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.11■□□□□ 0.65
Pcdhgc5Q91XW9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Pcdhgc5Q91XW9 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.11■□□□□ 0.65
Pcdhgc5Q91XW9 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.11■□□□□ 0.65
Pcdhgc5Q91XW9 Gm37722-201ENSMUST00000193757 208 ntBASIC19.11■□□□□ 0.65
Pcdhgc5Q91XW9 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.11■□□□□ 0.65
Pcdhgc5Q91XW9 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhgc5Q91XW9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhgc5Q91XW9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhgc5Q91XW9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhgc5Q91XW9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhgc5Q91XW9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhgc5Q91XW9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhgc5Q91XW9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.1■□□□□ 0.65
Pcdhgc5Q91XW9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhgc5Q91XW9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhgc5Q91XW9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Pcdhgc5Q91XW9 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC19.1■□□□□ 0.65
Pcdhgc5Q91XW9 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhgc5Q91XW9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Pcdhgc5Q91XW9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.1■□□□□ 0.65
Pcdhgc5Q91XW9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhgc5Q91XW9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Pcdhgc5Q91XW9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Pcdhgc5Q91XW9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgc5Q91XW9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.09■□□□□ 0.65
Pcdhgc5Q91XW9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgc5Q91XW9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Pcdhgc5Q91XW9 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgc5Q91XW9 Olfr129-201ENSMUST00000122318 993 ntBASIC19.09■□□□□ 0.65
Pcdhgc5Q91XW9 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.09■□□□□ 0.65
Pcdhgc5Q91XW9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgc5Q91XW9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Pcdhgc5Q91XW9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgc5Q91XW9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.09■□□□□ 0.65
Pcdhgc5Q91XW9 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgc5Q91XW9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgc5Q91XW9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgc5Q91XW9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgc5Q91XW9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgc5Q91XW9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Pcdhgc5Q91XW9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhgc5Q91XW9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhgc5Q91XW9 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhgc5Q91XW9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhgc5Q91XW9 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhgc5Q91XW9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhgc5Q91XW9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Pcdhgc5Q91XW9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Pcdhgc5Q91XW9 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Pcdhgc5Q91XW9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhgc5Q91XW9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhgc5Q91XW9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhgc5Q91XW9 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhgc5Q91XW9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhgc5Q91XW9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.07■□□□□ 0.64
Pcdhgc5Q91XW9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgc5Q91XW9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgc5Q91XW9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgc5Q91XW9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Pcdhgc5Q91XW9 Actl10-202ENSMUST00000226583 1501 ntBASIC19.07■□□□□ 0.64
Pcdhgc5Q91XW9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgc5Q91XW9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgc5Q91XW9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgc5Q91XW9 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgc5Q91XW9 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
Pcdhgc5Q91XW9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgc5Q91XW9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgc5Q91XW9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.07■□□□□ 0.64
Pcdhgc5Q91XW9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.07■□□□□ 0.64
Pcdhgc5Q91XW9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgc5Q91XW9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgc5Q91XW9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgc5Q91XW9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgc5Q91XW9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgc5Q91XW9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgc5Q91XW9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgc5Q91XW9 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgc5Q91XW9 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms