Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim60Q8VI40 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim60Q8VI40 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim60Q8VI40 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim60Q8VI40 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim60Q8VI40 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trim60Q8VI40 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim60Q8VI40 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim60Q8VI40 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim60Q8VI40 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.4■□□□□ 0.38
Trim60Q8VI40 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.4■□□□□ 0.38
Trim60Q8VI40 Gm15378-201ENSMUST00000121894 207 ntBASIC17.4■□□□□ 0.38
Trim60Q8VI40 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.4■□□□□ 0.38
Trim60Q8VI40 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim60Q8VI40 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim60Q8VI40 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim60Q8VI40 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim60Q8VI40 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim60Q8VI40 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim60Q8VI40 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trim60Q8VI40 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim60Q8VI40 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Trim60Q8VI40 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trim60Q8VI40 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.39■□□□□ 0.38
Trim60Q8VI40 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trim60Q8VI40 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trim60Q8VI40 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.39■□□□□ 0.38
Trim60Q8VI40 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Trim60Q8VI40 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Trim60Q8VI40 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim60Q8VI40 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim60Q8VI40 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.39■□□□□ 0.37
Trim60Q8VI40 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trim60Q8VI40 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim60Q8VI40 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trim60Q8VI40 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim60Q8VI40 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim60Q8VI40 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim60Q8VI40 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Trim60Q8VI40 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trim60Q8VI40 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.39■□□□□ 0.37
Trim60Q8VI40 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.39■□□□□ 0.37
Trim60Q8VI40 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim60Q8VI40 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Trim60Q8VI40 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.39■□□□□ 0.37
Trim60Q8VI40 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim60Q8VI40 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim60Q8VI40 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim60Q8VI40 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim60Q8VI40 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim60Q8VI40 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim60Q8VI40 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim60Q8VI40 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim60Q8VI40 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim60Q8VI40 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim60Q8VI40 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim60Q8VI40 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trim60Q8VI40 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Trim60Q8VI40 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim60Q8VI40 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.38■□□□□ 0.37
Trim60Q8VI40 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.38■□□□□ 0.37
Trim60Q8VI40 Gm37856-201ENSMUST00000191634 999 ntBASIC17.38■□□□□ 0.37
Trim60Q8VI40 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.38■□□□□ 0.37
Trim60Q8VI40 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Trim60Q8VI40 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Trim60Q8VI40 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim60Q8VI40 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Trim60Q8VI40 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim60Q8VI40 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim60Q8VI40 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trim60Q8VI40 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trim60Q8VI40 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Trim60Q8VI40 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.37■□□□□ 0.37
Trim60Q8VI40 Gm9731-201ENSMUST00000209480 747 ntBASIC17.37■□□□□ 0.37
Trim60Q8VI40 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.37■□□□□ 0.37
Trim60Q8VI40 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim60Q8VI40 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim60Q8VI40 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim60Q8VI40 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim60Q8VI40 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim60Q8VI40 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim60Q8VI40 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim60Q8VI40 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim60Q8VI40 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trim60Q8VI40 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim60Q8VI40 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim60Q8VI40 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim60Q8VI40 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim60Q8VI40 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.37■□□□□ 0.37
Trim60Q8VI40 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim60Q8VI40 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim60Q8VI40 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim60Q8VI40 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trim60Q8VI40 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim60Q8VI40 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim60Q8VI40 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trim60Q8VI40 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim60Q8VI40 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim60Q8VI40 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim60Q8VI40 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms