Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpa1Q8VEE4 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpa1Q8VEE4 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpa1Q8VEE4 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpa1Q8VEE4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Rpa1Q8VEE4 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpa1Q8VEE4 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rpa1Q8VEE4 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpa1Q8VEE4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpa1Q8VEE4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Rpa1Q8VEE4 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Rpa1Q8VEE4 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Rpa1Q8VEE4 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rpa1Q8VEE4 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.97■□□□□ 0.31
Rpa1Q8VEE4 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpa1Q8VEE4 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpa1Q8VEE4 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpa1Q8VEE4 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpa1Q8VEE4 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Rpa1Q8VEE4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Rpa1Q8VEE4 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpa1Q8VEE4 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpa1Q8VEE4 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Rpa1Q8VEE4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpa1Q8VEE4 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpa1Q8VEE4 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
Rpa1Q8VEE4 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpa1Q8VEE4 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpa1Q8VEE4 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpa1Q8VEE4 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.96■□□□□ 0.31
Rpa1Q8VEE4 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpa1Q8VEE4 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpa1Q8VEE4 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpa1Q8VEE4 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpa1Q8VEE4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpa1Q8VEE4 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpa1Q8VEE4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.96■□□□□ 0.31
Rpa1Q8VEE4 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Rpa1Q8VEE4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.96■□□□□ 0.31
Rpa1Q8VEE4 Gm26571-201ENSMUST00000181399 666 ntBASIC16.96■□□□□ 0.31
Rpa1Q8VEE4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rpa1Q8VEE4 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.96■□□□□ 0.31
Rpa1Q8VEE4 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Rpa1Q8VEE4 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rpa1Q8VEE4 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpa1Q8VEE4 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.96■□□□□ 0.3
Rpa1Q8VEE4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rpa1Q8VEE4 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpa1Q8VEE4 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpa1Q8VEE4 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.95■□□□□ 0.3
Rpa1Q8VEE4 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpa1Q8VEE4 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpa1Q8VEE4 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Rpa1Q8VEE4 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpa1Q8VEE4 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpa1Q8VEE4 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpa1Q8VEE4 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rpa1Q8VEE4 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Rpa1Q8VEE4 Gm44549-201ENSMUST00000208351 577 ntBASIC16.95■□□□□ 0.3
Rpa1Q8VEE4 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpa1Q8VEE4 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpa1Q8VEE4 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpa1Q8VEE4 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpa1Q8VEE4 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpa1Q8VEE4 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Rpa1Q8VEE4 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpa1Q8VEE4 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpa1Q8VEE4 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rpa1Q8VEE4 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpa1Q8VEE4 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpa1Q8VEE4 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rpa1Q8VEE4 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpa1Q8VEE4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpa1Q8VEE4 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rpa1Q8VEE4 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpa1Q8VEE4 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.94■□□□□ 0.3
Rpa1Q8VEE4 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpa1Q8VEE4 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpa1Q8VEE4 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Rpa1Q8VEE4 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpa1Q8VEE4 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rpa1Q8VEE4 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Rpa1Q8VEE4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.94■□□□□ 0.3
Rpa1Q8VEE4 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.94■□□□□ 0.3
Rpa1Q8VEE4 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.94■□□□□ 0.3
Rpa1Q8VEE4 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpa1Q8VEE4 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpa1Q8VEE4 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.94■□□□□ 0.3
Rpa1Q8VEE4 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpa1Q8VEE4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpa1Q8VEE4 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpa1Q8VEE4 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpa1Q8VEE4 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpa1Q8VEE4 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rpa1Q8VEE4 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.94■□□□□ 0.3
Rpa1Q8VEE4 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.94■□□□□ 0.3
Rpa1Q8VEE4 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpa1Q8VEE4 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpa1Q8VEE4 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpa1Q8VEE4 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms