Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rprd1aQ8VDS4 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rprd1aQ8VDS4 Gm8587-201ENSMUST00000076538 843 ntBASIC17.3■□□□□ 0.36
Rprd1aQ8VDS4 Gm10566-201ENSMUST00000086739 996 ntBASIC17.3■□□□□ 0.36
Rprd1aQ8VDS4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.3■□□□□ 0.36
Rprd1aQ8VDS4 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rprd1aQ8VDS4 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rprd1aQ8VDS4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rprd1aQ8VDS4 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rprd1aQ8VDS4 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rprd1aQ8VDS4 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rprd1aQ8VDS4 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Rprd1aQ8VDS4 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rprd1aQ8VDS4 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rprd1aQ8VDS4 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rprd1aQ8VDS4 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Rprd1aQ8VDS4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rprd1aQ8VDS4 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rprd1aQ8VDS4 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rprd1aQ8VDS4 Gm6659-201ENSMUST00000174752 547 ntBASIC17.29■□□□□ 0.36
Rprd1aQ8VDS4 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.29■□□□□ 0.36
Rprd1aQ8VDS4 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rprd1aQ8VDS4 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rprd1aQ8VDS4 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Rprd1aQ8VDS4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Rprd1aQ8VDS4 Actl10-202ENSMUST00000226583 1501 ntBASIC17.29■□□□□ 0.36
Rprd1aQ8VDS4 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rprd1aQ8VDS4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rprd1aQ8VDS4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rprd1aQ8VDS4 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rprd1aQ8VDS4 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rprd1aQ8VDS4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rprd1aQ8VDS4 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rprd1aQ8VDS4 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rprd1aQ8VDS4 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Rprd1aQ8VDS4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.28■□□□□ 0.36
Rprd1aQ8VDS4 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rprd1aQ8VDS4 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rprd1aQ8VDS4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rprd1aQ8VDS4 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rprd1aQ8VDS4 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rprd1aQ8VDS4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rprd1aQ8VDS4 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rprd1aQ8VDS4 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.28■□□□□ 0.36
Rprd1aQ8VDS4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rprd1aQ8VDS4 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Rprd1aQ8VDS4 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rprd1aQ8VDS4 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rprd1aQ8VDS4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rprd1aQ8VDS4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.28■□□□□ 0.36
Rprd1aQ8VDS4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rprd1aQ8VDS4 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rprd1aQ8VDS4 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rprd1aQ8VDS4 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rprd1aQ8VDS4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rprd1aQ8VDS4 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rprd1aQ8VDS4 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rprd1aQ8VDS4 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rprd1aQ8VDS4 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.27■□□□□ 0.36
Rprd1aQ8VDS4 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rprd1aQ8VDS4 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rprd1aQ8VDS4 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rprd1aQ8VDS4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rprd1aQ8VDS4 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rprd1aQ8VDS4 Gm26039-201ENSMUST00000158152 144 ntBASIC17.27■□□□□ 0.36
Rprd1aQ8VDS4 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.27■□□□□ 0.36
Rprd1aQ8VDS4 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.27■□□□□ 0.36
Rprd1aQ8VDS4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rprd1aQ8VDS4 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rprd1aQ8VDS4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rprd1aQ8VDS4 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Rprd1aQ8VDS4 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rprd1aQ8VDS4 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.27■□□□□ 0.35
Rprd1aQ8VDS4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rprd1aQ8VDS4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rprd1aQ8VDS4 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rprd1aQ8VDS4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rprd1aQ8VDS4 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rprd1aQ8VDS4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rprd1aQ8VDS4 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rprd1aQ8VDS4 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rprd1aQ8VDS4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rprd1aQ8VDS4 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.26■□□□□ 0.35
Rprd1aQ8VDS4 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rprd1aQ8VDS4 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rprd1aQ8VDS4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rprd1aQ8VDS4 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rprd1aQ8VDS4 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rprd1aQ8VDS4 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rprd1aQ8VDS4 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Rprd1aQ8VDS4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rprd1aQ8VDS4 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rprd1aQ8VDS4 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rprd1aQ8VDS4 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rprd1aQ8VDS4 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rprd1aQ8VDS4 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rprd1aQ8VDS4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rprd1aQ8VDS4 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rprd1aQ8VDS4 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rprd1aQ8VDS4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms