Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sgms1Q8VCQ6 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sgms1Q8VCQ6 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sgms1Q8VCQ6 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sgms1Q8VCQ6 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sgms1Q8VCQ6 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.17■□□□□ 0.5
Sgms1Q8VCQ6 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Sgms1Q8VCQ6 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Sgms1Q8VCQ6 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sgms1Q8VCQ6 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sgms1Q8VCQ6 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sgms1Q8VCQ6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Sgms1Q8VCQ6 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sgms1Q8VCQ6 Gm43799-201ENSMUST00000201845 579 ntBASIC18.17■□□□□ 0.5
Sgms1Q8VCQ6 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.17■□□□□ 0.5
Sgms1Q8VCQ6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.17■□□□□ 0.5
Sgms1Q8VCQ6 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sgms1Q8VCQ6 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sgms1Q8VCQ6 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sgms1Q8VCQ6 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sgms1Q8VCQ6 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sgms1Q8VCQ6 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sgms1Q8VCQ6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sgms1Q8VCQ6 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Sgms1Q8VCQ6 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sgms1Q8VCQ6 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sgms1Q8VCQ6 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Sgms1Q8VCQ6 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.16■□□□□ 0.5
Sgms1Q8VCQ6 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sgms1Q8VCQ6 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Sgms1Q8VCQ6 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Sgms1Q8VCQ6 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.16■□□□□ 0.5
Sgms1Q8VCQ6 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Sgms1Q8VCQ6 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.16■□□□□ 0.5
Sgms1Q8VCQ6 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Sgms1Q8VCQ6 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sgms1Q8VCQ6 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sgms1Q8VCQ6 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sgms1Q8VCQ6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.16■□□□□ 0.5
Sgms1Q8VCQ6 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sgms1Q8VCQ6 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Sgms1Q8VCQ6 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Sgms1Q8VCQ6 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Sgms1Q8VCQ6 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sgms1Q8VCQ6 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sgms1Q8VCQ6 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sgms1Q8VCQ6 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sgms1Q8VCQ6 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sgms1Q8VCQ6 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sgms1Q8VCQ6 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sgms1Q8VCQ6 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Sgms1Q8VCQ6 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Sgms1Q8VCQ6 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Sgms1Q8VCQ6 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Sgms1Q8VCQ6 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sgms1Q8VCQ6 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sgms1Q8VCQ6 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.15■□□□□ 0.5
Sgms1Q8VCQ6 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.15■□□□□ 0.5
Sgms1Q8VCQ6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sgms1Q8VCQ6 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sgms1Q8VCQ6 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sgms1Q8VCQ6 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sgms1Q8VCQ6 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Sgms1Q8VCQ6 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Sgms1Q8VCQ6 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Sgms1Q8VCQ6 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Sgms1Q8VCQ6 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Sgms1Q8VCQ6 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Sgms1Q8VCQ6 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Sgms1Q8VCQ6 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sgms1Q8VCQ6 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sgms1Q8VCQ6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sgms1Q8VCQ6 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sgms1Q8VCQ6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sgms1Q8VCQ6 Gm6433-201ENSMUST00000118634 875 ntBASIC18.14■□□□□ 0.49
Sgms1Q8VCQ6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sgms1Q8VCQ6 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.14■□□□□ 0.49
Sgms1Q8VCQ6 Gm30025-201ENSMUST00000218555 728 ntBASIC18.14■□□□□ 0.49
Sgms1Q8VCQ6 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sgms1Q8VCQ6 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sgms1Q8VCQ6 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Sgms1Q8VCQ6 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sgms1Q8VCQ6 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Sgms1Q8VCQ6 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sgms1Q8VCQ6 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sgms1Q8VCQ6 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.14■□□□□ 0.49
Sgms1Q8VCQ6 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sgms1Q8VCQ6 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.13■□□□□ 0.49
Sgms1Q8VCQ6 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sgms1Q8VCQ6 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sgms1Q8VCQ6 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sgms1Q8VCQ6 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Sgms1Q8VCQ6 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Sgms1Q8VCQ6 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.13■□□□□ 0.49
Sgms1Q8VCQ6 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sgms1Q8VCQ6 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sgms1Q8VCQ6 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sgms1Q8VCQ6 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Sgms1Q8VCQ6 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.13■□□□□ 0.49
Sgms1Q8VCQ6 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms