Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
Atf7Q8R0S1 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Atf7Q8R0S1 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Atf7Q8R0S1 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.85■□□□□ 0.77
Atf7Q8R0S1 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Atf7Q8R0S1 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.85■□□□□ 0.77
Atf7Q8R0S1 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Atf7Q8R0S1 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Atf7Q8R0S1 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atf7Q8R0S1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atf7Q8R0S1 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atf7Q8R0S1 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atf7Q8R0S1 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Atf7Q8R0S1 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atf7Q8R0S1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Atf7Q8R0S1 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
Atf7Q8R0S1 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Atf7Q8R0S1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atf7Q8R0S1 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atf7Q8R0S1 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atf7Q8R0S1 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Atf7Q8R0S1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atf7Q8R0S1 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.84■□□□□ 0.77
Atf7Q8R0S1 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atf7Q8R0S1 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.83■□□□□ 0.77
Atf7Q8R0S1 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Atf7Q8R0S1 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Atf7Q8R0S1 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Atf7Q8R0S1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Atf7Q8R0S1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Atf7Q8R0S1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Atf7Q8R0S1 Gm2274-201ENSMUST00000184539 609 ntBASIC19.83■□□□□ 0.77
Atf7Q8R0S1 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Atf7Q8R0S1 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Atf7Q8R0S1 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Atf7Q8R0S1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Atf7Q8R0S1 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Atf7Q8R0S1 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atf7Q8R0S1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atf7Q8R0S1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Atf7Q8R0S1 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Atf7Q8R0S1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atf7Q8R0S1 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Atf7Q8R0S1 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atf7Q8R0S1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Atf7Q8R0S1 Gm13559-201ENSMUST00000120476 863 ntBASIC19.82■□□□□ 0.76
Atf7Q8R0S1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Atf7Q8R0S1 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Atf7Q8R0S1 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atf7Q8R0S1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atf7Q8R0S1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atf7Q8R0S1 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atf7Q8R0S1 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atf7Q8R0S1 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.82■□□□□ 0.76
Atf7Q8R0S1 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atf7Q8R0S1 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atf7Q8R0S1 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atf7Q8R0S1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atf7Q8R0S1 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atf7Q8R0S1 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atf7Q8R0S1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Atf7Q8R0S1 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atf7Q8R0S1 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Atf7Q8R0S1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atf7Q8R0S1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atf7Q8R0S1 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atf7Q8R0S1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atf7Q8R0S1 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.81■□□□□ 0.76
Atf7Q8R0S1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atf7Q8R0S1 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.81■□□□□ 0.76
Atf7Q8R0S1 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atf7Q8R0S1 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atf7Q8R0S1 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atf7Q8R0S1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Atf7Q8R0S1 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atf7Q8R0S1 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atf7Q8R0S1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.8■□□□□ 0.76
Atf7Q8R0S1 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atf7Q8R0S1 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atf7Q8R0S1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atf7Q8R0S1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Atf7Q8R0S1 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Atf7Q8R0S1 Gm16061-201ENSMUST00000122167 857 ntBASIC19.8■□□□□ 0.76
Atf7Q8R0S1 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atf7Q8R0S1 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
Atf7Q8R0S1 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atf7Q8R0S1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Atf7Q8R0S1 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Atf7Q8R0S1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atf7Q8R0S1 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Atf7Q8R0S1 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atf7Q8R0S1 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Atf7Q8R0S1 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Atf7Q8R0S1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Atf7Q8R0S1 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Atf7Q8R0S1 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Atf7Q8R0S1 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Atf7Q8R0S1 Gm13186-201ENSMUST00000118031 316 ntBASIC19.79■□□□□ 0.76
Atf7Q8R0S1 Gm10252-201ENSMUST00000209541 832 ntBASIC19.79■□□□□ 0.76
Atf7Q8R0S1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms