Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col23a1Q8K4G2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Col23a1Q8K4G2 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col23a1Q8K4G2 Gm4459-201ENSMUST00000118750 468 ntBASIC20.42■□□□□ 0.86
Col23a1Q8K4G2 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC20.42■□□□□ 0.86
Col23a1Q8K4G2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC20.42■□□□□ 0.86
Col23a1Q8K4G2 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC20.42■□□□□ 0.86
Col23a1Q8K4G2 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Col23a1Q8K4G2 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Col23a1Q8K4G2 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC20.42■□□□□ 0.86
Col23a1Q8K4G2 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC20.42■□□□□ 0.86
Col23a1Q8K4G2 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Col23a1Q8K4G2 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col23a1Q8K4G2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col23a1Q8K4G2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col23a1Q8K4G2 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col23a1Q8K4G2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col23a1Q8K4G2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Col23a1Q8K4G2 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC20.41■□□□□ 0.86
Col23a1Q8K4G2 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC20.41■□□□□ 0.86
Col23a1Q8K4G2 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col23a1Q8K4G2 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Col23a1Q8K4G2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Col23a1Q8K4G2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col23a1Q8K4G2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Col23a1Q8K4G2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Col23a1Q8K4G2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col23a1Q8K4G2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col23a1Q8K4G2 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Col23a1Q8K4G2 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Col23a1Q8K4G2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Col23a1Q8K4G2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC20.4■□□□□ 0.86
Col23a1Q8K4G2 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC20.4■□□□□ 0.86
Col23a1Q8K4G2 Mir8117-201ENSMUST00000184773 107 ntBASIC20.4■□□□□ 0.86
Col23a1Q8K4G2 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC20.4■□□□□ 0.86
Col23a1Q8K4G2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Col23a1Q8K4G2 AC114585.2-202ENSMUST00000228094 426 ntBASIC20.4■□□□□ 0.86
Col23a1Q8K4G2 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col23a1Q8K4G2 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col23a1Q8K4G2 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Col23a1Q8K4G2 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col23a1Q8K4G2 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC20.4■□□□□ 0.86
Col23a1Q8K4G2 Grk6-206ENSMUST00000224995 2971 ntBASIC20.4■□□□□ 0.86
Col23a1Q8K4G2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Col23a1Q8K4G2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Col23a1Q8K4G2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Col23a1Q8K4G2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col23a1Q8K4G2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Col23a1Q8K4G2 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Col23a1Q8K4G2 Gm3928-201ENSMUST00000121141 1307 ntBASIC20.39■□□□□ 0.85
Col23a1Q8K4G2 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col23a1Q8K4G2 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col23a1Q8K4G2 Gm7222-201ENSMUST00000117512 906 ntBASIC20.39■□□□□ 0.85
Col23a1Q8K4G2 Gm12497-201ENSMUST00000138778 237 ntBASIC20.39■□□□□ 0.85
Col23a1Q8K4G2 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC20.39■□□□□ 0.85
Col23a1Q8K4G2 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col23a1Q8K4G2 Gm7507-201ENSMUST00000183053 1008 ntBASIC20.39■□□□□ 0.85
Col23a1Q8K4G2 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC20.39■□□□□ 0.85
Col23a1Q8K4G2 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col23a1Q8K4G2 Gm15500-202ENSMUST00000071641 1019 ntBASIC20.39■□□□□ 0.85
Col23a1Q8K4G2 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC20.39■□□□□ 0.85
Col23a1Q8K4G2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Col23a1Q8K4G2 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col23a1Q8K4G2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col23a1Q8K4G2 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col23a1Q8K4G2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col23a1Q8K4G2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC20.39■□□□□ 0.85
Col23a1Q8K4G2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col23a1Q8K4G2 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col23a1Q8K4G2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Col23a1Q8K4G2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Col23a1Q8K4G2 Gm8784-201ENSMUST00000222096 1435 ntBASIC20.38■□□□□ 0.85
Col23a1Q8K4G2 Gm13127-201ENSMUST00000118978 1389 ntBASIC20.38■□□□□ 0.85
Col23a1Q8K4G2 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Col23a1Q8K4G2 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col23a1Q8K4G2 AC174742.1-201ENSMUST00000218272 304 ntBASIC20.38■□□□□ 0.85
Col23a1Q8K4G2 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Col23a1Q8K4G2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.38■□□□□ 0.85
Col23a1Q8K4G2 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col23a1Q8K4G2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col23a1Q8K4G2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col23a1Q8K4G2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col23a1Q8K4G2 Gm14701-201ENSMUST00000117156 348 ntBASIC20.37■□□□□ 0.85
Col23a1Q8K4G2 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC20.37■□□□□ 0.85
Col23a1Q8K4G2 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col23a1Q8K4G2 AC159114.1-201ENSMUST00000220349 266 ntBASIC20.37■□□□□ 0.85
Col23a1Q8K4G2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Col23a1Q8K4G2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col23a1Q8K4G2 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.37■□□□□ 0.85
Col23a1Q8K4G2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Col23a1Q8K4G2 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col23a1Q8K4G2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col23a1Q8K4G2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Col23a1Q8K4G2 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col23a1Q8K4G2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col23a1Q8K4G2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col23a1Q8K4G2 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col23a1Q8K4G2 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col23a1Q8K4G2 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col23a1Q8K4G2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms