Protein–RNA interactions for Protein: Q8K2T8

Paf1, RNA polymerase II-associated factor 1 homolog, mousemouse

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Paf1Q8K2T8 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.69■□□□□ 0.74
Paf1Q8K2T8 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Paf1Q8K2T8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Paf1Q8K2T8 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Paf1Q8K2T8 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Paf1Q8K2T8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Paf1Q8K2T8 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Paf1Q8K2T8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Paf1Q8K2T8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Paf1Q8K2T8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Paf1Q8K2T8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Paf1Q8K2T8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.68■□□□□ 0.74
Paf1Q8K2T8 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Paf1Q8K2T8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Paf1Q8K2T8 Mir1668-201ENSMUST00000184114 107 ntBASIC19.68■□□□□ 0.74
Paf1Q8K2T8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.68■□□□□ 0.74
Paf1Q8K2T8 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Paf1Q8K2T8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Paf1Q8K2T8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Paf1Q8K2T8 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.68■□□□□ 0.74
Paf1Q8K2T8 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Paf1Q8K2T8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Paf1Q8K2T8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Paf1Q8K2T8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Paf1Q8K2T8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Paf1Q8K2T8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Paf1Q8K2T8 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Paf1Q8K2T8 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Paf1Q8K2T8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Paf1Q8K2T8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Paf1Q8K2T8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Paf1Q8K2T8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Paf1Q8K2T8 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Paf1Q8K2T8 Gm7213-201ENSMUST00000215977 950 ntBASIC19.67■□□□□ 0.74
Paf1Q8K2T8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Paf1Q8K2T8 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Paf1Q8K2T8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Paf1Q8K2T8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Paf1Q8K2T8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Paf1Q8K2T8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Paf1Q8K2T8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Paf1Q8K2T8 Actl10-202ENSMUST00000226583 1501 ntBASIC19.66■□□□□ 0.74
Paf1Q8K2T8 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Paf1Q8K2T8 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Paf1Q8K2T8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Paf1Q8K2T8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Paf1Q8K2T8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.66■□□□□ 0.74
Paf1Q8K2T8 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Paf1Q8K2T8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Paf1Q8K2T8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Paf1Q8K2T8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Paf1Q8K2T8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Paf1Q8K2T8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Paf1Q8K2T8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Paf1Q8K2T8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Paf1Q8K2T8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Paf1Q8K2T8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Paf1Q8K2T8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Paf1Q8K2T8 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.66■□□□□ 0.74
Paf1Q8K2T8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Paf1Q8K2T8 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.66■□□□□ 0.74
Paf1Q8K2T8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Paf1Q8K2T8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Paf1Q8K2T8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Paf1Q8K2T8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Paf1Q8K2T8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Paf1Q8K2T8 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Paf1Q8K2T8 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.65■□□□□ 0.74
Paf1Q8K2T8 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Paf1Q8K2T8 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Paf1Q8K2T8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Paf1Q8K2T8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Paf1Q8K2T8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Paf1Q8K2T8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Paf1Q8K2T8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Paf1Q8K2T8 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Paf1Q8K2T8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Paf1Q8K2T8 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Paf1Q8K2T8 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Paf1Q8K2T8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Paf1Q8K2T8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.65■□□□□ 0.74
Paf1Q8K2T8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Paf1Q8K2T8 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Paf1Q8K2T8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Paf1Q8K2T8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Paf1Q8K2T8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Paf1Q8K2T8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Paf1Q8K2T8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Paf1Q8K2T8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Paf1Q8K2T8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Paf1Q8K2T8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Paf1Q8K2T8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Paf1Q8K2T8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.64■□□□□ 0.74
Paf1Q8K2T8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Paf1Q8K2T8 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Paf1Q8K2T8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.64■□□□□ 0.73
Paf1Q8K2T8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Paf1Q8K2T8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Paf1Q8K2T8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Paf1Q8K2T8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms