Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgcs1Q8JZK9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgcs1Q8JZK9 Gm27011-201ENSMUST00000182352 972 ntBASIC16.06■□□□□ 0.16
Hmgcs1Q8JZK9 Gm8520-201ENSMUST00000186517 868 ntBASIC16.06■□□□□ 0.16
Hmgcs1Q8JZK9 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Hmgcs1Q8JZK9 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgcs1Q8JZK9 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgcs1Q8JZK9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Hmgcs1Q8JZK9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgcs1Q8JZK9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgcs1Q8JZK9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hmgcs1Q8JZK9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
Hmgcs1Q8JZK9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcs1Q8JZK9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcs1Q8JZK9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcs1Q8JZK9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcs1Q8JZK9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcs1Q8JZK9 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcs1Q8JZK9 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcs1Q8JZK9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.05■□□□□ 0.16
Hmgcs1Q8JZK9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.05■□□□□ 0.16
Hmgcs1Q8JZK9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcs1Q8JZK9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.05■□□□□ 0.16
Hmgcs1Q8JZK9 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcs1Q8JZK9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcs1Q8JZK9 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcs1Q8JZK9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcs1Q8JZK9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Hmgcs1Q8JZK9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcs1Q8JZK9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Hmgcs1Q8JZK9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcs1Q8JZK9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcs1Q8JZK9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Hmgcs1Q8JZK9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Hmgcs1Q8JZK9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.05■□□□□ 0.16
Hmgcs1Q8JZK9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.05■□□□□ 0.16
Hmgcs1Q8JZK9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcs1Q8JZK9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcs1Q8JZK9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcs1Q8JZK9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcs1Q8JZK9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hmgcs1Q8JZK9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hmgcs1Q8JZK9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hmgcs1Q8JZK9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hmgcs1Q8JZK9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Hmgcs1Q8JZK9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hmgcs1Q8JZK9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hmgcs1Q8JZK9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hmgcs1Q8JZK9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hmgcs1Q8JZK9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hmgcs1Q8JZK9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.04■□□□□ 0.16
Hmgcs1Q8JZK9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hmgcs1Q8JZK9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hmgcs1Q8JZK9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hmgcs1Q8JZK9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hmgcs1Q8JZK9 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hmgcs1Q8JZK9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hmgcs1Q8JZK9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hmgcs1Q8JZK9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hmgcs1Q8JZK9 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hmgcs1Q8JZK9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Hmgcs1Q8JZK9 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Hmgcs1Q8JZK9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Hmgcs1Q8JZK9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hmgcs1Q8JZK9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hmgcs1Q8JZK9 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hmgcs1Q8JZK9 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hmgcs1Q8JZK9 Mir1199-201ENSMUST00000117015 119 ntBASIC16.03■□□□□ 0.16
Hmgcs1Q8JZK9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hmgcs1Q8JZK9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hmgcs1Q8JZK9 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hmgcs1Q8JZK9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hmgcs1Q8JZK9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hmgcs1Q8JZK9 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hmgcs1Q8JZK9 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hmgcs1Q8JZK9 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.03■□□□□ 0.16
Hmgcs1Q8JZK9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Hmgcs1Q8JZK9 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hmgcs1Q8JZK9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Hmgcs1Q8JZK9 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hmgcs1Q8JZK9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hmgcs1Q8JZK9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Hmgcs1Q8JZK9 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hmgcs1Q8JZK9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hmgcs1Q8JZK9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hmgcs1Q8JZK9 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Hmgcs1Q8JZK9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hmgcs1Q8JZK9 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hmgcs1Q8JZK9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hmgcs1Q8JZK9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hmgcs1Q8JZK9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.02■□□□□ 0.16
Hmgcs1Q8JZK9 Gm7638-201ENSMUST00000121348 967 ntBASIC16.02■□□□□ 0.16
Hmgcs1Q8JZK9 Gm9731-201ENSMUST00000209480 747 ntBASIC16.02■□□□□ 0.16
Hmgcs1Q8JZK9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hmgcs1Q8JZK9 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hmgcs1Q8JZK9 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hmgcs1Q8JZK9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hmgcs1Q8JZK9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Hmgcs1Q8JZK9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Hmgcs1Q8JZK9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms