Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh1Q8CGV4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rdh1Q8CGV4 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rdh1Q8CGV4 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.34■□□□□ 0.21
Rdh1Q8CGV4 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rdh1Q8CGV4 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rdh1Q8CGV4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Rdh1Q8CGV4 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rdh1Q8CGV4 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rdh1Q8CGV4 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.34■□□□□ 0.21
Rdh1Q8CGV4 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.34■□□□□ 0.21
Rdh1Q8CGV4 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.34■□□□□ 0.21
Rdh1Q8CGV4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rdh1Q8CGV4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.34■□□□□ 0.21
Rdh1Q8CGV4 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.34■□□□□ 0.21
Rdh1Q8CGV4 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.34■□□□□ 0.21
Rdh1Q8CGV4 Gm45328-201ENSMUST00000210942 917 ntBASIC16.34■□□□□ 0.21
Rdh1Q8CGV4 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.34■□□□□ 0.21
Rdh1Q8CGV4 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rdh1Q8CGV4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Rdh1Q8CGV4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Rdh1Q8CGV4 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rdh1Q8CGV4 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rdh1Q8CGV4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rdh1Q8CGV4 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rdh1Q8CGV4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rdh1Q8CGV4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rdh1Q8CGV4 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rdh1Q8CGV4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rdh1Q8CGV4 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.34■□□□□ 0.21
Rdh1Q8CGV4 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rdh1Q8CGV4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rdh1Q8CGV4 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rdh1Q8CGV4 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rdh1Q8CGV4 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.33■□□□□ 0.21
Rdh1Q8CGV4 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.33■□□□□ 0.2
Rdh1Q8CGV4 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Rdh1Q8CGV4 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rdh1Q8CGV4 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rdh1Q8CGV4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rdh1Q8CGV4 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.33■□□□□ 0.2
Rdh1Q8CGV4 Gm44450-201ENSMUST00000199528 114 ntBASIC16.33■□□□□ 0.2
Rdh1Q8CGV4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rdh1Q8CGV4 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rdh1Q8CGV4 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rdh1Q8CGV4 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.33■□□□□ 0.2
Rdh1Q8CGV4 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rdh1Q8CGV4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rdh1Q8CGV4 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rdh1Q8CGV4 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Rdh1Q8CGV4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.33■□□□□ 0.2
Rdh1Q8CGV4 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rdh1Q8CGV4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rdh1Q8CGV4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rdh1Q8CGV4 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rdh1Q8CGV4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rdh1Q8CGV4 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.32■□□□□ 0.2
Rdh1Q8CGV4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rdh1Q8CGV4 Gm27742-201ENSMUST00000184667 60 ntBASIC16.32■□□□□ 0.2
Rdh1Q8CGV4 Gm18421-201ENSMUST00000204122 625 ntBASIC16.32■□□□□ 0.2
Rdh1Q8CGV4 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.32■□□□□ 0.2
Rdh1Q8CGV4 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rdh1Q8CGV4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rdh1Q8CGV4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rdh1Q8CGV4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rdh1Q8CGV4 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rdh1Q8CGV4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh1Q8CGV4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh1Q8CGV4 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh1Q8CGV4 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.31■□□□□ 0.2
Rdh1Q8CGV4 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh1Q8CGV4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh1Q8CGV4 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh1Q8CGV4 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rdh1Q8CGV4 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh1Q8CGV4 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rdh1Q8CGV4 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh1Q8CGV4 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.31■□□□□ 0.2
Rdh1Q8CGV4 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rdh1Q8CGV4 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh1Q8CGV4 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh1Q8CGV4 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh1Q8CGV4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh1Q8CGV4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh1Q8CGV4 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.31■□□□□ 0.2
Rdh1Q8CGV4 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh1Q8CGV4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh1Q8CGV4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh1Q8CGV4 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh1Q8CGV4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rdh1Q8CGV4 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh1Q8CGV4 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh1Q8CGV4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.31■□□□□ 0.2
Rdh1Q8CGV4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rdh1Q8CGV4 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rdh1Q8CGV4 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rdh1Q8CGV4 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rdh1Q8CGV4 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rdh1Q8CGV4 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rdh1Q8CGV4 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms