Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.24■□□□□ 0.67
Smc2Q8CG48 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc2Q8CG48 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.24■□□□□ 0.67
Smc2Q8CG48 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smc2Q8CG48 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc2Q8CG48 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc2Q8CG48 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc2Q8CG48 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc2Q8CG48 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc2Q8CG48 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc2Q8CG48 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc2Q8CG48 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc2Q8CG48 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Smc2Q8CG48 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smc2Q8CG48 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Smc2Q8CG48 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smc2Q8CG48 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc2Q8CG48 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc2Q8CG48 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc2Q8CG48 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Smc2Q8CG48 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc2Q8CG48 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smc2Q8CG48 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc2Q8CG48 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Smc2Q8CG48 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc2Q8CG48 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Smc2Q8CG48 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Smc2Q8CG48 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc2Q8CG48 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc2Q8CG48 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc2Q8CG48 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc2Q8CG48 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc2Q8CG48 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smc2Q8CG48 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc2Q8CG48 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.22■□□□□ 0.67
Smc2Q8CG48 Gm18958-201ENSMUST00000174258 762 ntBASIC19.22■□□□□ 0.67
Smc2Q8CG48 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Smc2Q8CG48 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc2Q8CG48 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc2Q8CG48 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc2Q8CG48 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc2Q8CG48 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc2Q8CG48 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc2Q8CG48 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc2Q8CG48 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.21■□□□□ 0.67
Smc2Q8CG48 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.21■□□□□ 0.67
Smc2Q8CG48 Gm13216-201ENSMUST00000117145 591 ntBASIC19.21■□□□□ 0.67
Smc2Q8CG48 Gm27011-201ENSMUST00000182352 972 ntBASIC19.21■□□□□ 0.67
Smc2Q8CG48 Gm27000-201ENSMUST00000182943 842 ntBASIC19.21■□□□□ 0.67
Smc2Q8CG48 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc2Q8CG48 Gm3375-201ENSMUST00000203929 796 ntBASIC19.21■□□□□ 0.67
Smc2Q8CG48 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.21■□□□□ 0.67
Smc2Q8CG48 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.21■□□□□ 0.67
Smc2Q8CG48 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.21■□□□□ 0.67
Smc2Q8CG48 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc2Q8CG48 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc2Q8CG48 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Smc2Q8CG48 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.21■□□□□ 0.67
Smc2Q8CG48 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc2Q8CG48 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc2Q8CG48 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc2Q8CG48 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc2Q8CG48 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc2Q8CG48 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc2Q8CG48 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smc2Q8CG48 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc2Q8CG48 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc2Q8CG48 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smc2Q8CG48 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc2Q8CG48 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc2Q8CG48 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.2■□□□□ 0.66
Smc2Q8CG48 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc2Q8CG48 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc2Q8CG48 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc2Q8CG48 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smc2Q8CG48 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smc2Q8CG48 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.2■□□□□ 0.66
Smc2Q8CG48 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Smc2Q8CG48 Gm7791-201ENSMUST00000219066 539 ntBASIC19.2■□□□□ 0.66
Smc2Q8CG48 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc2Q8CG48 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smc2Q8CG48 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.2■□□□□ 0.66
Smc2Q8CG48 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.2■□□□□ 0.66
Smc2Q8CG48 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc2Q8CG48 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc2Q8CG48 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc2Q8CG48 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc2Q8CG48 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smc2Q8CG48 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc2Q8CG48 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc2Q8CG48 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc2Q8CG48 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Smc2Q8CG48 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc2Q8CG48 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc2Q8CG48 Gm21814-202ENSMUST00000203277 873 ntBASIC19.19■□□□□ 0.66
Smc2Q8CG48 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Smc2Q8CG48 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc2Q8CG48 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.19■□□□□ 0.66
Smc2Q8CG48 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smc2Q8CG48 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms