Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc4Q8CG47 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc4Q8CG47 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smc4Q8CG47 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc4Q8CG47 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc4Q8CG47 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC20.72■□□□□ 0.91
Smc4Q8CG47 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc4Q8CG47 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc4Q8CG47 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc4Q8CG47 Gm9103-201ENSMUST00000119371 405 ntBASIC20.72■□□□□ 0.91
Smc4Q8CG47 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Smc4Q8CG47 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smc4Q8CG47 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smc4Q8CG47 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.72■□□□□ 0.91
Smc4Q8CG47 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc4Q8CG47 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smc4Q8CG47 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc4Q8CG47 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smc4Q8CG47 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc4Q8CG47 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc4Q8CG47 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smc4Q8CG47 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc4Q8CG47 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.72■□□□□ 0.91
Smc4Q8CG47 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc4Q8CG47 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc4Q8CG47 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc4Q8CG47 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc4Q8CG47 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc4Q8CG47 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc4Q8CG47 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc4Q8CG47 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smc4Q8CG47 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smc4Q8CG47 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Smc4Q8CG47 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Smc4Q8CG47 Gm29707-201ENSMUST00000196325 491 ntBASIC20.71■□□□□ 0.91
Smc4Q8CG47 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc4Q8CG47 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.71■□□□□ 0.91
Smc4Q8CG47 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc4Q8CG47 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smc4Q8CG47 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc4Q8CG47 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc4Q8CG47 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smc4Q8CG47 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smc4Q8CG47 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smc4Q8CG47 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Smc4Q8CG47 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smc4Q8CG47 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Smc4Q8CG47 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Smc4Q8CG47 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Smc4Q8CG47 Gm27742-201ENSMUST00000184667 60 ntBASIC20.7■□□□□ 0.9
Smc4Q8CG47 Gm44450-201ENSMUST00000199528 114 ntBASIC20.7■□□□□ 0.9
Smc4Q8CG47 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Smc4Q8CG47 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smc4Q8CG47 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smc4Q8CG47 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smc4Q8CG47 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smc4Q8CG47 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smc4Q8CG47 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Smc4Q8CG47 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Smc4Q8CG47 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Smc4Q8CG47 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc4Q8CG47 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Smc4Q8CG47 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Smc4Q8CG47 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Smc4Q8CG47 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC20.69■□□□□ 0.9
Smc4Q8CG47 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc4Q8CG47 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc4Q8CG47 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc4Q8CG47 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc4Q8CG47 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc4Q8CG47 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Smc4Q8CG47 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc4Q8CG47 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Smc4Q8CG47 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc4Q8CG47 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Smc4Q8CG47 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Smc4Q8CG47 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc4Q8CG47 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Smc4Q8CG47 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc4Q8CG47 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc4Q8CG47 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc4Q8CG47 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc4Q8CG47 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc4Q8CG47 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc4Q8CG47 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc4Q8CG47 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Smc4Q8CG47 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Smc4Q8CG47 Gm17807-201ENSMUST00000186869 298 ntBASIC20.68■□□□□ 0.9
Smc4Q8CG47 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc4Q8CG47 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.68■□□□□ 0.9
Smc4Q8CG47 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc4Q8CG47 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc4Q8CG47 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.68■□□□□ 0.9
Smc4Q8CG47 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc4Q8CG47 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc4Q8CG47 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.68■□□□□ 0.9
Smc4Q8CG47 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc4Q8CG47 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc4Q8CG47 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc4Q8CG47 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 128 ms