Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc28bQ8CEG5 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc28bQ8CEG5 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc28bQ8CEG5 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ccdc28bQ8CEG5 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc28bQ8CEG5 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc28bQ8CEG5 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc28bQ8CEG5 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc28bQ8CEG5 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc28bQ8CEG5 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ccdc28bQ8CEG5 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ccdc28bQ8CEG5 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc28bQ8CEG5 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc28bQ8CEG5 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc28bQ8CEG5 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ccdc28bQ8CEG5 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Ccdc28bQ8CEG5 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Ccdc28bQ8CEG5 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc28bQ8CEG5 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc28bQ8CEG5 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc28bQ8CEG5 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc28bQ8CEG5 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc28bQ8CEG5 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.64■□□□□ 0.25
Ccdc28bQ8CEG5 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc28bQ8CEG5 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.64■□□□□ 0.25
Ccdc28bQ8CEG5 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc28bQ8CEG5 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc28bQ8CEG5 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc28bQ8CEG5 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc28bQ8CEG5 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc28bQ8CEG5 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.64■□□□□ 0.25
Ccdc28bQ8CEG5 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc28bQ8CEG5 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc28bQ8CEG5 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc28bQ8CEG5 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc28bQ8CEG5 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc28bQ8CEG5 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc28bQ8CEG5 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc28bQ8CEG5 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc28bQ8CEG5 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc28bQ8CEG5 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc28bQ8CEG5 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc28bQ8CEG5 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc28bQ8CEG5 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc28bQ8CEG5 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc28bQ8CEG5 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc28bQ8CEG5 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc28bQ8CEG5 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Ccdc28bQ8CEG5 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc28bQ8CEG5 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc28bQ8CEG5 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ccdc28bQ8CEG5 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc28bQ8CEG5 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc28bQ8CEG5 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.63■□□□□ 0.25
Ccdc28bQ8CEG5 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc28bQ8CEG5 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc28bQ8CEG5 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.63■□□□□ 0.25
Ccdc28bQ8CEG5 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.63■□□□□ 0.25
Ccdc28bQ8CEG5 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.63■□□□□ 0.25
Ccdc28bQ8CEG5 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc28bQ8CEG5 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc28bQ8CEG5 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc28bQ8CEG5 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc28bQ8CEG5 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28bQ8CEG5 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ccdc28bQ8CEG5 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28bQ8CEG5 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28bQ8CEG5 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.62■□□□□ 0.25
Ccdc28bQ8CEG5 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28bQ8CEG5 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28bQ8CEG5 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Ccdc28bQ8CEG5 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28bQ8CEG5 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28bQ8CEG5 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.62■□□□□ 0.25
Ccdc28bQ8CEG5 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28bQ8CEG5 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28bQ8CEG5 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28bQ8CEG5 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28bQ8CEG5 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28bQ8CEG5 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28bQ8CEG5 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28bQ8CEG5 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28bQ8CEG5 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28bQ8CEG5 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.62■□□□□ 0.25
Ccdc28bQ8CEG5 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28bQ8CEG5 Mtag2-201ENSMUST00000058665 714 ntBASIC16.62■□□□□ 0.25
Ccdc28bQ8CEG5 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28bQ8CEG5 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28bQ8CEG5 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28bQ8CEG5 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28bQ8CEG5 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28bQ8CEG5 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28bQ8CEG5 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28bQ8CEG5 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ccdc28bQ8CEG5 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ccdc28bQ8CEG5 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc28bQ8CEG5 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc28bQ8CEG5 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc28bQ8CEG5 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccdc28bQ8CEG5 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms