Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nup88Q8CEC0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Nup88Q8CEC0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nup88Q8CEC0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Nup88Q8CEC0 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nup88Q8CEC0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Nup88Q8CEC0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Nup88Q8CEC0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Nup88Q8CEC0 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.83■□□□□ 0.77
Nup88Q8CEC0 Gm45058-201ENSMUST00000205810 766 ntBASIC19.83■□□□□ 0.77
Nup88Q8CEC0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Nup88Q8CEC0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nup88Q8CEC0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nup88Q8CEC0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nup88Q8CEC0 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nup88Q8CEC0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Nup88Q8CEC0 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Nup88Q8CEC0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nup88Q8CEC0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nup88Q8CEC0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Nup88Q8CEC0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nup88Q8CEC0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Nup88Q8CEC0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nup88Q8CEC0 Gm18032-201ENSMUST00000222541 538 ntBASIC19.82■□□□□ 0.76
Nup88Q8CEC0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nup88Q8CEC0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nup88Q8CEC0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nup88Q8CEC0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nup88Q8CEC0 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nup88Q8CEC0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nup88Q8CEC0 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.81■□□□□ 0.76
Nup88Q8CEC0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nup88Q8CEC0 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nup88Q8CEC0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nup88Q8CEC0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nup88Q8CEC0 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nup88Q8CEC0 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nup88Q8CEC0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nup88Q8CEC0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nup88Q8CEC0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.81■□□□□ 0.76
Nup88Q8CEC0 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.81■□□□□ 0.76
Nup88Q8CEC0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nup88Q8CEC0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nup88Q8CEC0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.81■□□□□ 0.76
Nup88Q8CEC0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nup88Q8CEC0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nup88Q8CEC0 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.81■□□□□ 0.76
Nup88Q8CEC0 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nup88Q8CEC0 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.8■□□□□ 0.76
Nup88Q8CEC0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nup88Q8CEC0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nup88Q8CEC0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nup88Q8CEC0 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Nup88Q8CEC0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.8■□□□□ 0.76
Nup88Q8CEC0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nup88Q8CEC0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Nup88Q8CEC0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Nup88Q8CEC0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nup88Q8CEC0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Nup88Q8CEC0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.8■□□□□ 0.76
Nup88Q8CEC0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nup88Q8CEC0 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nup88Q8CEC0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nup88Q8CEC0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup88Q8CEC0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup88Q8CEC0 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup88Q8CEC0 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup88Q8CEC0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup88Q8CEC0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Nup88Q8CEC0 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.79■□□□□ 0.76
Nup88Q8CEC0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup88Q8CEC0 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup88Q8CEC0 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.79■□□□□ 0.76
Nup88Q8CEC0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nup88Q8CEC0 Gm4974-201ENSMUST00000209974 875 ntBASIC19.79■□□□□ 0.76
Nup88Q8CEC0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Nup88Q8CEC0 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup88Q8CEC0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup88Q8CEC0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup88Q8CEC0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup88Q8CEC0 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup88Q8CEC0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup88Q8CEC0 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nup88Q8CEC0 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Nup88Q8CEC0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nup88Q8CEC0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup88Q8CEC0 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup88Q8CEC0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup88Q8CEC0 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Nup88Q8CEC0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nup88Q8CEC0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nup88Q8CEC0 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nup88Q8CEC0 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nup88Q8CEC0 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nup88Q8CEC0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nup88Q8CEC0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nup88Q8CEC0 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.78■□□□□ 0.76
Nup88Q8CEC0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nup88Q8CEC0 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Nup88Q8CEC0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms