Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Ccdc38Q8CDN8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.66■□□□□ 0.58
Ccdc38Q8CDN8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc38Q8CDN8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc38Q8CDN8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc38Q8CDN8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc38Q8CDN8 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc38Q8CDN8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc38Q8CDN8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc38Q8CDN8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc38Q8CDN8 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc38Q8CDN8 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc38Q8CDN8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc38Q8CDN8 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc38Q8CDN8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ccdc38Q8CDN8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc38Q8CDN8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc38Q8CDN8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc38Q8CDN8 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.65■□□□□ 0.58
Ccdc38Q8CDN8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.65■□□□□ 0.58
Ccdc38Q8CDN8 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc38Q8CDN8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.65■□□□□ 0.58
Ccdc38Q8CDN8 Gm7791-201ENSMUST00000219066 539 ntBASIC18.65■□□□□ 0.58
Ccdc38Q8CDN8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.65■□□□□ 0.58
Ccdc38Q8CDN8 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.65■□□□□ 0.58
Ccdc38Q8CDN8 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc38Q8CDN8 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Ccdc38Q8CDN8 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc38Q8CDN8 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ccdc38Q8CDN8 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc38Q8CDN8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc38Q8CDN8 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc38Q8CDN8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc38Q8CDN8 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ccdc38Q8CDN8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
Ccdc38Q8CDN8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Ccdc38Q8CDN8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc38Q8CDN8 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc38Q8CDN8 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc38Q8CDN8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Ccdc38Q8CDN8 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc38Q8CDN8 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc38Q8CDN8 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc38Q8CDN8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc38Q8CDN8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc38Q8CDN8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Ccdc38Q8CDN8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.64■□□□□ 0.57
Ccdc38Q8CDN8 Gm3375-201ENSMUST00000203929 796 ntBASIC18.64■□□□□ 0.57
Ccdc38Q8CDN8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.64■□□□□ 0.57
Ccdc38Q8CDN8 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc38Q8CDN8 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.64■□□□□ 0.57
Ccdc38Q8CDN8 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ccdc38Q8CDN8 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc38Q8CDN8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc38Q8CDN8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc38Q8CDN8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc38Q8CDN8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc38Q8CDN8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc38Q8CDN8 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc38Q8CDN8 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc38Q8CDN8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc38Q8CDN8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc38Q8CDN8 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc38Q8CDN8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc38Q8CDN8 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc38Q8CDN8 Gm21814-202ENSMUST00000203277 873 ntBASIC18.63■□□□□ 0.57
Ccdc38Q8CDN8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc38Q8CDN8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc38Q8CDN8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc38Q8CDN8 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc38Q8CDN8 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc38Q8CDN8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc38Q8CDN8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc38Q8CDN8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.63■□□□□ 0.57
Ccdc38Q8CDN8 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Ccdc38Q8CDN8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc38Q8CDN8 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc38Q8CDN8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.62■□□□□ 0.57
Ccdc38Q8CDN8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc38Q8CDN8 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc38Q8CDN8 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc38Q8CDN8 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.62■□□□□ 0.57
Ccdc38Q8CDN8 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc38Q8CDN8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc38Q8CDN8 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc38Q8CDN8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc38Q8CDN8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc38Q8CDN8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc38Q8CDN8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc38Q8CDN8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.62■□□□□ 0.57
Ccdc38Q8CDN8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc38Q8CDN8 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc38Q8CDN8 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc38Q8CDN8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc38Q8CDN8 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc38Q8CDN8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc38Q8CDN8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc38Q8CDN8 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc38Q8CDN8 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc38Q8CDN8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms