Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.08■□□□□ 0.48
Vcpip1Q8CDG3 Gm17661-201ENSMUST00000170317 270 ntBASIC18.08■□□□□ 0.48
Vcpip1Q8CDG3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vcpip1Q8CDG3 Gm37025-201ENSMUST00000195159 829 ntBASIC18.08■□□□□ 0.48
Vcpip1Q8CDG3 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vcpip1Q8CDG3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vcpip1Q8CDG3 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Vcpip1Q8CDG3 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.08■□□□□ 0.48
Vcpip1Q8CDG3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Vcpip1Q8CDG3 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vcpip1Q8CDG3 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vcpip1Q8CDG3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Vcpip1Q8CDG3 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.07■□□□□ 0.48
Vcpip1Q8CDG3 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vcpip1Q8CDG3 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vcpip1Q8CDG3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vcpip1Q8CDG3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vcpip1Q8CDG3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vcpip1Q8CDG3 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vcpip1Q8CDG3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vcpip1Q8CDG3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vcpip1Q8CDG3 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vcpip1Q8CDG3 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vcpip1Q8CDG3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Vcpip1Q8CDG3 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vcpip1Q8CDG3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.07■□□□□ 0.48
Vcpip1Q8CDG3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vcpip1Q8CDG3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vcpip1Q8CDG3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.07■□□□□ 0.48
Vcpip1Q8CDG3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vcpip1Q8CDG3 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Vcpip1Q8CDG3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vcpip1Q8CDG3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vcpip1Q8CDG3 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vcpip1Q8CDG3 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vcpip1Q8CDG3 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vcpip1Q8CDG3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Vcpip1Q8CDG3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vcpip1Q8CDG3 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.07■□□□□ 0.48
Vcpip1Q8CDG3 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vcpip1Q8CDG3 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Vcpip1Q8CDG3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.06■□□□□ 0.48
Vcpip1Q8CDG3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Vcpip1Q8CDG3 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.06■□□□□ 0.48
Vcpip1Q8CDG3 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vcpip1Q8CDG3 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vcpip1Q8CDG3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vcpip1Q8CDG3 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.06■□□□□ 0.48
Vcpip1Q8CDG3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.06■□□□□ 0.48
Vcpip1Q8CDG3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Vcpip1Q8CDG3 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.06■□□□□ 0.48
Vcpip1Q8CDG3 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Vcpip1Q8CDG3 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vcpip1Q8CDG3 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Vcpip1Q8CDG3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vcpip1Q8CDG3 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vcpip1Q8CDG3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vcpip1Q8CDG3 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.06■□□□□ 0.48
Vcpip1Q8CDG3 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vcpip1Q8CDG3 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Vcpip1Q8CDG3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Vcpip1Q8CDG3 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vcpip1Q8CDG3 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vcpip1Q8CDG3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Vcpip1Q8CDG3 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vcpip1Q8CDG3 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Vcpip1Q8CDG3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.05■□□□□ 0.48
Vcpip1Q8CDG3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vcpip1Q8CDG3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vcpip1Q8CDG3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vcpip1Q8CDG3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vcpip1Q8CDG3 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vcpip1Q8CDG3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Vcpip1Q8CDG3 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vcpip1Q8CDG3 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.05■□□□□ 0.48
Vcpip1Q8CDG3 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vcpip1Q8CDG3 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vcpip1Q8CDG3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.04■□□□□ 0.48
Vcpip1Q8CDG3 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.04■□□□□ 0.48
Vcpip1Q8CDG3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Vcpip1Q8CDG3 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vcpip1Q8CDG3 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vcpip1Q8CDG3 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Vcpip1Q8CDG3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Vcpip1Q8CDG3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Vcpip1Q8CDG3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Vcpip1Q8CDG3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.04■□□□□ 0.48
Vcpip1Q8CDG3 Gm15565-201ENSMUST00000118890 427 ntBASIC18.04■□□□□ 0.48
Vcpip1Q8CDG3 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Vcpip1Q8CDG3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.04■□□□□ 0.48
Vcpip1Q8CDG3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Vcpip1Q8CDG3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Vcpip1Q8CDG3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Vcpip1Q8CDG3 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.04■□□□□ 0.48
Vcpip1Q8CDG3 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vcpip1Q8CDG3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Vcpip1Q8CDG3 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vcpip1Q8CDG3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Vcpip1Q8CDG3 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vcpip1Q8CDG3 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms