Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Alx1Q8C8B0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Alx1Q8C8B0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Alx1Q8C8B0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Alx1Q8C8B0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Alx1Q8C8B0 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.63■□□□□ 0.73
Alx1Q8C8B0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Alx1Q8C8B0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Alx1Q8C8B0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Alx1Q8C8B0 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Alx1Q8C8B0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Alx1Q8C8B0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Alx1Q8C8B0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Alx1Q8C8B0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Alx1Q8C8B0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Alx1Q8C8B0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Alx1Q8C8B0 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Alx1Q8C8B0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Alx1Q8C8B0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Alx1Q8C8B0 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Alx1Q8C8B0 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.62■□□□□ 0.73
Alx1Q8C8B0 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Alx1Q8C8B0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.62■□□□□ 0.73
Alx1Q8C8B0 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.62■□□□□ 0.73
Alx1Q8C8B0 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Alx1Q8C8B0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
Alx1Q8C8B0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
Alx1Q8C8B0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Alx1Q8C8B0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Alx1Q8C8B0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Alx1Q8C8B0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
Alx1Q8C8B0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Alx1Q8C8B0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Alx1Q8C8B0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Alx1Q8C8B0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Alx1Q8C8B0 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Alx1Q8C8B0 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Alx1Q8C8B0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Alx1Q8C8B0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Alx1Q8C8B0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Alx1Q8C8B0 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Alx1Q8C8B0 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.61■□□□□ 0.73
Alx1Q8C8B0 Gm17808-201ENSMUST00000200859 894 ntBASIC19.61■□□□□ 0.73
Alx1Q8C8B0 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Alx1Q8C8B0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Alx1Q8C8B0 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Alx1Q8C8B0 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Alx1Q8C8B0 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Alx1Q8C8B0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Alx1Q8C8B0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Alx1Q8C8B0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.61■□□□□ 0.73
Alx1Q8C8B0 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Alx1Q8C8B0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Alx1Q8C8B0 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Alx1Q8C8B0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Alx1Q8C8B0 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Alx1Q8C8B0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.6■□□□□ 0.73
Alx1Q8C8B0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Alx1Q8C8B0 Gm11950-201ENSMUST00000121615 838 ntBASIC19.6■□□□□ 0.73
Alx1Q8C8B0 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.6■□□□□ 0.73
Alx1Q8C8B0 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.6■□□□□ 0.73
Alx1Q8C8B0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.6■□□□□ 0.73
Alx1Q8C8B0 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Alx1Q8C8B0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Alx1Q8C8B0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Alx1Q8C8B0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Alx1Q8C8B0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.6■□□□□ 0.73
Alx1Q8C8B0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Alx1Q8C8B0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
Alx1Q8C8B0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Alx1Q8C8B0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Alx1Q8C8B0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Alx1Q8C8B0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Alx1Q8C8B0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Alx1Q8C8B0 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Alx1Q8C8B0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Alx1Q8C8B0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.59■□□□□ 0.73
Alx1Q8C8B0 Gm6623-201ENSMUST00000173570 544 ntBASIC19.59■□□□□ 0.73
Alx1Q8C8B0 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Alx1Q8C8B0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Alx1Q8C8B0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Alx1Q8C8B0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Alx1Q8C8B0 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Alx1Q8C8B0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Alx1Q8C8B0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
Alx1Q8C8B0 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Alx1Q8C8B0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Alx1Q8C8B0 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Alx1Q8C8B0 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Alx1Q8C8B0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Alx1Q8C8B0 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Alx1Q8C8B0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Alx1Q8C8B0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.58■□□□□ 0.73
Alx1Q8C8B0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.58■□□□□ 0.73
Alx1Q8C8B0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Alx1Q8C8B0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Alx1Q8C8B0 Gm13216-201ENSMUST00000117145 591 ntBASIC19.58■□□□□ 0.72
Alx1Q8C8B0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.58■□□□□ 0.72
Alx1Q8C8B0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.72
Alx1Q8C8B0 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms