Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ptcd1Q8C2E4 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ptcd1Q8C2E4 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ptcd1Q8C2E4 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ptcd1Q8C2E4 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC20.64■□□□□ 0.89
Ptcd1Q8C2E4 Gm12644-201ENSMUST00000119935 606 ntBASIC20.64■□□□□ 0.89
Ptcd1Q8C2E4 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC20.64■□□□□ 0.89
Ptcd1Q8C2E4 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ptcd1Q8C2E4 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC20.64■□□□□ 0.89
Ptcd1Q8C2E4 Gm1818-201ENSMUST00000169406 1184 ntBASIC20.64■□□□□ 0.89
Ptcd1Q8C2E4 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Ptcd1Q8C2E4 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Ptcd1Q8C2E4 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Ptcd1Q8C2E4 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ptcd1Q8C2E4 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.64■□□□□ 0.89
Ptcd1Q8C2E4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Ptcd1Q8C2E4 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ptcd1Q8C2E4 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Ptcd1Q8C2E4 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ptcd1Q8C2E4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ptcd1Q8C2E4 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ptcd1Q8C2E4 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ptcd1Q8C2E4 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Ptcd1Q8C2E4 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ptcd1Q8C2E4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.63■□□□□ 0.89
Ptcd1Q8C2E4 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ptcd1Q8C2E4 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ptcd1Q8C2E4 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC20.63■□□□□ 0.89
Ptcd1Q8C2E4 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC20.63■□□□□ 0.89
Ptcd1Q8C2E4 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC20.63■□□□□ 0.89
Ptcd1Q8C2E4 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ptcd1Q8C2E4 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ptcd1Q8C2E4 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ptcd1Q8C2E4 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ptcd1Q8C2E4 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ptcd1Q8C2E4 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ptcd1Q8C2E4 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ptcd1Q8C2E4 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ptcd1Q8C2E4 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ptcd1Q8C2E4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
Ptcd1Q8C2E4 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ptcd1Q8C2E4 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ptcd1Q8C2E4 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ptcd1Q8C2E4 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Ptcd1Q8C2E4 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptcd1Q8C2E4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptcd1Q8C2E4 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptcd1Q8C2E4 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptcd1Q8C2E4 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ptcd1Q8C2E4 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ptcd1Q8C2E4 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Ptcd1Q8C2E4 AC108846.1-201ENSMUST00000214531 513 ntBASIC20.62■□□□□ 0.89
Ptcd1Q8C2E4 AC138767.1-201ENSMUST00000222661 415 ntBASIC20.62■□□□□ 0.89
Ptcd1Q8C2E4 Vti1a-206ENSMUST00000225529 1244 ntBASIC20.62■□□□□ 0.89
Ptcd1Q8C2E4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
Ptcd1Q8C2E4 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptcd1Q8C2E4 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC20.62■□□□□ 0.89
Ptcd1Q8C2E4 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptcd1Q8C2E4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptcd1Q8C2E4 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ptcd1Q8C2E4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptcd1Q8C2E4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptcd1Q8C2E4 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptcd1Q8C2E4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptcd1Q8C2E4 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ptcd1Q8C2E4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptcd1Q8C2E4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Ptcd1Q8C2E4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ptcd1Q8C2E4 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptcd1Q8C2E4 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptcd1Q8C2E4 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptcd1Q8C2E4 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Ptcd1Q8C2E4 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Ptcd1Q8C2E4 Gm1401-201ENSMUST00000122048 772 ntBASIC20.61■□□□□ 0.89
Ptcd1Q8C2E4 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptcd1Q8C2E4 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ptcd1Q8C2E4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptcd1Q8C2E4 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ptcd1Q8C2E4 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.61■□□□□ 0.89
Ptcd1Q8C2E4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ptcd1Q8C2E4 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptcd1Q8C2E4 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.6■□□□□ 0.89
Ptcd1Q8C2E4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ptcd1Q8C2E4 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptcd1Q8C2E4 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptcd1Q8C2E4 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ptcd1Q8C2E4 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptcd1Q8C2E4 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptcd1Q8C2E4 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Ptcd1Q8C2E4 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ptcd1Q8C2E4 AC125350.1-201ENSMUST00000225115 903 ntBASIC20.6■□□□□ 0.89
Ptcd1Q8C2E4 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptcd1Q8C2E4 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Ptcd1Q8C2E4 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC20.6■□□□□ 0.89
Ptcd1Q8C2E4 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptcd1Q8C2E4 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptcd1Q8C2E4 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptcd1Q8C2E4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptcd1Q8C2E4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptcd1Q8C2E4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms