Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Cps1Q8C196 Fcho2-208ENSMUST00000224992 2964 ntBASIC22.63■■□□□ 1.21
Cps1Q8C196 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Cps1Q8C196 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Cps1Q8C196 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Cps1Q8C196 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Cps1Q8C196 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC22.62■■□□□ 1.21
Cps1Q8C196 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC22.62■■□□□ 1.21
Cps1Q8C196 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Cps1Q8C196 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
Cps1Q8C196 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Cps1Q8C196 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Cps1Q8C196 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Cps1Q8C196 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC22.62■■□□□ 1.21
Cps1Q8C196 AC107711.5-202ENSMUST00000226429 702 ntBASIC22.62■■□□□ 1.21
Cps1Q8C196 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Cps1Q8C196 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Cps1Q8C196 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cps1Q8C196 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.61■■□□□ 1.21
Cps1Q8C196 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cps1Q8C196 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cps1Q8C196 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cps1Q8C196 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC22.61■■□□□ 1.21
Cps1Q8C196 Gm12260-201ENSMUST00000122447 411 ntBASIC22.61■■□□□ 1.21
Cps1Q8C196 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Cps1Q8C196 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Cps1Q8C196 AC154222.1-201ENSMUST00000223882 475 ntBASIC22.61■■□□□ 1.21
Cps1Q8C196 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cps1Q8C196 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cps1Q8C196 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cps1Q8C196 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Cps1Q8C196 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cps1Q8C196 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Cps1Q8C196 Gm23935-201ENSMUST00000102303 57 ntBASIC22.6■■□□□ 1.21
Cps1Q8C196 Gm24270-201ENSMUST00000102326 57 ntBASIC22.6■■□□□ 1.21
Cps1Q8C196 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cps1Q8C196 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cps1Q8C196 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cps1Q8C196 Gm24245-201ENSMUST00000157318 57 ntBASIC22.6■■□□□ 1.21
Cps1Q8C196 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Cps1Q8C196 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC22.6■■□□□ 1.21
Cps1Q8C196 AC131586.3-201ENSMUST00000228355 1367 ntBASIC22.6■■□□□ 1.21
Cps1Q8C196 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cps1Q8C196 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cps1Q8C196 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cps1Q8C196 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cps1Q8C196 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.6■■□□□ 1.21
Cps1Q8C196 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cps1Q8C196 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cps1Q8C196 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cps1Q8C196 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Cps1Q8C196 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC22.59■■□□□ 1.21
Cps1Q8C196 Gm25911-201ENSMUST00000157621 56 ntBASIC22.59■■□□□ 1.21
Cps1Q8C196 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC22.59■■□□□ 1.21
Cps1Q8C196 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Cps1Q8C196 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Cps1Q8C196 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Cps1Q8C196 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cps1Q8C196 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cps1Q8C196 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cps1Q8C196 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cps1Q8C196 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC22.59■■□□□ 1.21
Cps1Q8C196 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Cps1Q8C196 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Cps1Q8C196 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Cps1Q8C196 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC22.58■■□□□ 1.21
Cps1Q8C196 Gm9727-201ENSMUST00000161387 555 ntBASIC22.58■■□□□ 1.21
Cps1Q8C196 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC22.58■■□□□ 1.21
Cps1Q8C196 Gm43575-201ENSMUST00000196420 516 ntBASIC22.58■■□□□ 1.21
Cps1Q8C196 CT943659.1-201ENSMUST00000215459 326 ntBASIC22.58■■□□□ 1.21
Cps1Q8C196 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Cps1Q8C196 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Cps1Q8C196 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Cps1Q8C196 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Cps1Q8C196 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Cps1Q8C196 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Cps1Q8C196 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Cps1Q8C196 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC22.57■■□□□ 1.2
Cps1Q8C196 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC22.57■■□□□ 1.2
Cps1Q8C196 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC22.57■■□□□ 1.2
Cps1Q8C196 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Cps1Q8C196 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC22.57■■□□□ 1.2
Cps1Q8C196 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cps1Q8C196 Gm15590-201ENSMUST00000078419 552 ntBASIC22.57■■□□□ 1.2
Cps1Q8C196 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Cps1Q8C196 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Cps1Q8C196 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Cps1Q8C196 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Cps1Q8C196 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cps1Q8C196 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Cps1Q8C196 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cps1Q8C196 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Cps1Q8C196 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC22.57■■□□□ 1.2
Cps1Q8C196 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Cps1Q8C196 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cps1Q8C196 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cps1Q8C196 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC22.57■■□□□ 1.2
Cps1Q8C196 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cps1Q8C196 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cps1Q8C196 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms