Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.78■□□□□ 0.12
Vps9d1Q8C190 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps9d1Q8C190 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Vps9d1Q8C190 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Vps9d1Q8C190 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps9d1Q8C190 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps9d1Q8C190 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps9d1Q8C190 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.77■□□□□ 0.12
Vps9d1Q8C190 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Vps9d1Q8C190 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps9d1Q8C190 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps9d1Q8C190 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Vps9d1Q8C190 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vps9d1Q8C190 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vps9d1Q8C190 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vps9d1Q8C190 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.77■□□□□ 0.11
Vps9d1Q8C190 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vps9d1Q8C190 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vps9d1Q8C190 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.77■□□□□ 0.11
Vps9d1Q8C190 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Vps9d1Q8C190 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Vps9d1Q8C190 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Vps9d1Q8C190 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.77■□□□□ 0.11
Vps9d1Q8C190 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.77■□□□□ 0.11
Vps9d1Q8C190 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vps9d1Q8C190 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.76■□□□□ 0.11
Vps9d1Q8C190 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps9d1Q8C190 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps9d1Q8C190 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps9d1Q8C190 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps9d1Q8C190 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vps9d1Q8C190 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Vps9d1Q8C190 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
Vps9d1Q8C190 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps9d1Q8C190 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps9d1Q8C190 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Vps9d1Q8C190 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps9d1Q8C190 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Vps9d1Q8C190 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.76■□□□□ 0.11
Vps9d1Q8C190 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Vps9d1Q8C190 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.76■□□□□ 0.11
Vps9d1Q8C190 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vps9d1Q8C190 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps9d1Q8C190 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps9d1Q8C190 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps9d1Q8C190 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps9d1Q8C190 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps9d1Q8C190 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps9d1Q8C190 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps9d1Q8C190 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps9d1Q8C190 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps9d1Q8C190 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
Vps9d1Q8C190 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.75■□□□□ 0.11
Vps9d1Q8C190 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps9d1Q8C190 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vps9d1Q8C190 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps9d1Q8C190 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps9d1Q8C190 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.75■□□□□ 0.11
Vps9d1Q8C190 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps9d1Q8C190 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Vps9d1Q8C190 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps9d1Q8C190 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps9d1Q8C190 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vps9d1Q8C190 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps9d1Q8C190 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps9d1Q8C190 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
Vps9d1Q8C190 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
Vps9d1Q8C190 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps9d1Q8C190 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Vps9d1Q8C190 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps9d1Q8C190 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps9d1Q8C190 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps9d1Q8C190 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps9d1Q8C190 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Vps9d1Q8C190 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps9d1Q8C190 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps9d1Q8C190 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Vps9d1Q8C190 Gm11249-201ENSMUST00000117071 859 ntBASIC15.74■□□□□ 0.11
Vps9d1Q8C190 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps9d1Q8C190 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.74■□□□□ 0.11
Vps9d1Q8C190 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.74■□□□□ 0.11
Vps9d1Q8C190 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps9d1Q8C190 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps9d1Q8C190 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps9d1Q8C190 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps9d1Q8C190 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps9d1Q8C190 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vps9d1Q8C190 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps9d1Q8C190 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps9d1Q8C190 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps9d1Q8C190 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps9d1Q8C190 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps9d1Q8C190 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Vps9d1Q8C190 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vps9d1Q8C190 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps9d1Q8C190 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vps9d1Q8C190 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.73■□□□□ 0.11
Vps9d1Q8C190 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps9d1Q8C190 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Vps9d1Q8C190 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms