Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Usp47Q8BY87 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Usp47Q8BY87 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Usp47Q8BY87 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Usp47Q8BY87 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Usp47Q8BY87 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Usp47Q8BY87 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Usp47Q8BY87 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC23.72■■□□□ 1.39
Usp47Q8BY87 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Usp47Q8BY87 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Usp47Q8BY87 Dapk1-207ENSMUST00000226059 5009 ntBASIC23.71■■□□□ 1.39
Usp47Q8BY87 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Usp47Q8BY87 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Usp47Q8BY87 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Usp47Q8BY87 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Usp47Q8BY87 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC23.71■■□□□ 1.39
Usp47Q8BY87 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
Usp47Q8BY87 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Usp47Q8BY87 Slc35b2-202ENSMUST00000223987 1766 ntBASIC23.71■■□□□ 1.39
Usp47Q8BY87 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Usp47Q8BY87 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Usp47Q8BY87 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Usp47Q8BY87 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Usp47Q8BY87 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Usp47Q8BY87 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Usp47Q8BY87 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
Usp47Q8BY87 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Usp47Q8BY87 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Usp47Q8BY87 Gm15442-201ENSMUST00000117905 1527 ntBASIC23.7■■□□□ 1.38
Usp47Q8BY87 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Usp47Q8BY87 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Usp47Q8BY87 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Usp47Q8BY87 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Usp47Q8BY87 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Usp47Q8BY87 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Usp47Q8BY87 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC23.69■■□□□ 1.38
Usp47Q8BY87 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Usp47Q8BY87 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Usp47Q8BY87 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC23.69■■□□□ 1.38
Usp47Q8BY87 Mir3081-201ENSMUST00000175305 84 ntBASIC23.69■■□□□ 1.38
Usp47Q8BY87 Gm28033-201ENSMUST00000184224 96 ntBASIC23.69■■□□□ 1.38
Usp47Q8BY87 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Usp47Q8BY87 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Usp47Q8BY87 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Usp47Q8BY87 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Usp47Q8BY87 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC23.69■■□□□ 1.38
Usp47Q8BY87 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Usp47Q8BY87 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Usp47Q8BY87 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Usp47Q8BY87 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Usp47Q8BY87 Gm18669-201ENSMUST00000216049 778 ntBASIC23.68■■□□□ 1.38
Usp47Q8BY87 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC23.68■■□□□ 1.38
Usp47Q8BY87 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC23.68■■□□□ 1.38
Usp47Q8BY87 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Usp47Q8BY87 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Usp47Q8BY87 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Usp47Q8BY87 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC23.68■■□□□ 1.38
Usp47Q8BY87 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Usp47Q8BY87 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
Usp47Q8BY87 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Usp47Q8BY87 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Usp47Q8BY87 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC23.68■■□□□ 1.38
Usp47Q8BY87 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Usp47Q8BY87 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Usp47Q8BY87 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Usp47Q8BY87 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Usp47Q8BY87 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Usp47Q8BY87 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Usp47Q8BY87 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
Usp47Q8BY87 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
Usp47Q8BY87 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
Usp47Q8BY87 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Usp47Q8BY87 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Usp47Q8BY87 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Usp47Q8BY87 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Usp47Q8BY87 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Usp47Q8BY87 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC23.67■■□□□ 1.38
Usp47Q8BY87 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Usp47Q8BY87 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Usp47Q8BY87 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Usp47Q8BY87 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC23.67■■□□□ 1.38
Usp47Q8BY87 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Usp47Q8BY87 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Usp47Q8BY87 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Usp47Q8BY87 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
Usp47Q8BY87 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Usp47Q8BY87 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Usp47Q8BY87 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Usp47Q8BY87 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Usp47Q8BY87 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Usp47Q8BY87 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Usp47Q8BY87 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Usp47Q8BY87 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Usp47Q8BY87 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Usp47Q8BY87 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Usp47Q8BY87 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Usp47Q8BY87 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Usp47Q8BY87 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Usp47Q8BY87 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Usp47Q8BY87 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC23.65■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms