Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trerf1Q8BXJ2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trerf1Q8BXJ2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trerf1Q8BXJ2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trerf1Q8BXJ2 Gm12085-201ENSMUST00000119263 940 ntBASIC17.72■□□□□ 0.43
Trerf1Q8BXJ2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.72■□□□□ 0.43
Trerf1Q8BXJ2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trerf1Q8BXJ2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.72■□□□□ 0.43
Trerf1Q8BXJ2 Mir7071-201ENSMUST00000184847 69 ntBASIC17.72■□□□□ 0.43
Trerf1Q8BXJ2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trerf1Q8BXJ2 Gm21814-202ENSMUST00000203277 873 ntBASIC17.72■□□□□ 0.43
Trerf1Q8BXJ2 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trerf1Q8BXJ2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trerf1Q8BXJ2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trerf1Q8BXJ2 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trerf1Q8BXJ2 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trerf1Q8BXJ2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trerf1Q8BXJ2 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Trerf1Q8BXJ2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trerf1Q8BXJ2 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trerf1Q8BXJ2 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trerf1Q8BXJ2 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.71■□□□□ 0.43
Trerf1Q8BXJ2 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trerf1Q8BXJ2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.71■□□□□ 0.43
Trerf1Q8BXJ2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trerf1Q8BXJ2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trerf1Q8BXJ2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.71■□□□□ 0.43
Trerf1Q8BXJ2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trerf1Q8BXJ2 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.71■□□□□ 0.43
Trerf1Q8BXJ2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Trerf1Q8BXJ2 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trerf1Q8BXJ2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trerf1Q8BXJ2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trerf1Q8BXJ2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.71■□□□□ 0.43
Trerf1Q8BXJ2 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.71■□□□□ 0.43
Trerf1Q8BXJ2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Trerf1Q8BXJ2 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trerf1Q8BXJ2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trerf1Q8BXJ2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trerf1Q8BXJ2 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Trerf1Q8BXJ2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trerf1Q8BXJ2 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Trerf1Q8BXJ2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trerf1Q8BXJ2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.7■□□□□ 0.42
Trerf1Q8BXJ2 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trerf1Q8BXJ2 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trerf1Q8BXJ2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
Trerf1Q8BXJ2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trerf1Q8BXJ2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trerf1Q8BXJ2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trerf1Q8BXJ2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.7■□□□□ 0.42
Trerf1Q8BXJ2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trerf1Q8BXJ2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trerf1Q8BXJ2 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.7■□□□□ 0.42
Trerf1Q8BXJ2 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trerf1Q8BXJ2 Timm23-208ENSMUST00000226683 750 ntBASIC17.7■□□□□ 0.42
Trerf1Q8BXJ2 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.7■□□□□ 0.42
Trerf1Q8BXJ2 Odf3b-204ENSMUST00000227834 930 ntBASIC17.7■□□□□ 0.42
Trerf1Q8BXJ2 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trerf1Q8BXJ2 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trerf1Q8BXJ2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trerf1Q8BXJ2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trerf1Q8BXJ2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trerf1Q8BXJ2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trerf1Q8BXJ2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trerf1Q8BXJ2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trerf1Q8BXJ2 Dancr-204ENSMUST00000132389 2347 ntBASIC17.7■□□□□ 0.42
Trerf1Q8BXJ2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Trerf1Q8BXJ2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trerf1Q8BXJ2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trerf1Q8BXJ2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trerf1Q8BXJ2 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trerf1Q8BXJ2 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trerf1Q8BXJ2 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trerf1Q8BXJ2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trerf1Q8BXJ2 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trerf1Q8BXJ2 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trerf1Q8BXJ2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trerf1Q8BXJ2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Trerf1Q8BXJ2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trerf1Q8BXJ2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.69■□□□□ 0.42
Trerf1Q8BXJ2 Gm5417-201ENSMUST00000079706 384 ntBASIC17.69■□□□□ 0.42
Trerf1Q8BXJ2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trerf1Q8BXJ2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trerf1Q8BXJ2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trerf1Q8BXJ2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trerf1Q8BXJ2 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trerf1Q8BXJ2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Trerf1Q8BXJ2 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.68■□□□□ 0.42
Trerf1Q8BXJ2 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trerf1Q8BXJ2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trerf1Q8BXJ2 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trerf1Q8BXJ2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.68■□□□□ 0.42
Trerf1Q8BXJ2 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trerf1Q8BXJ2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trerf1Q8BXJ2 Gm15565-201ENSMUST00000118890 427 ntBASIC17.68■□□□□ 0.42
Trerf1Q8BXJ2 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trerf1Q8BXJ2 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.68■□□□□ 0.42
Trerf1Q8BXJ2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trerf1Q8BXJ2 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms