Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ubr7Q8BU04 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ubr7Q8BU04 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ubr7Q8BU04 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ubr7Q8BU04 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Ubr7Q8BU04 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.96■□□□□ 0.31
Ubr7Q8BU04 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ubr7Q8BU04 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ubr7Q8BU04 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ubr7Q8BU04 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ubr7Q8BU04 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ubr7Q8BU04 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ubr7Q8BU04 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ubr7Q8BU04 Gm15794-201ENSMUST00000120182 631 ntBASIC16.96■□□□□ 0.31
Ubr7Q8BU04 Gm27742-201ENSMUST00000184667 60 ntBASIC16.96■□□□□ 0.31
Ubr7Q8BU04 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ubr7Q8BU04 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Ubr7Q8BU04 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ubr7Q8BU04 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Ubr7Q8BU04 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ubr7Q8BU04 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ubr7Q8BU04 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ubr7Q8BU04 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ubr7Q8BU04 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ubr7Q8BU04 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ubr7Q8BU04 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ubr7Q8BU04 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ubr7Q8BU04 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ubr7Q8BU04 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ubr7Q8BU04 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ubr7Q8BU04 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ubr7Q8BU04 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ubr7Q8BU04 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ubr7Q8BU04 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ubr7Q8BU04 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ubr7Q8BU04 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ubr7Q8BU04 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ubr7Q8BU04 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
Ubr7Q8BU04 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ubr7Q8BU04 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ubr7Q8BU04 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ubr7Q8BU04 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ubr7Q8BU04 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.94■□□□□ 0.3
Ubr7Q8BU04 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ubr7Q8BU04 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.94■□□□□ 0.3
Ubr7Q8BU04 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ubr7Q8BU04 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ubr7Q8BU04 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ubr7Q8BU04 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ubr7Q8BU04 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ubr7Q8BU04 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.94■□□□□ 0.3
Ubr7Q8BU04 Olfr129-201ENSMUST00000122318 993 ntBASIC16.94■□□□□ 0.3
Ubr7Q8BU04 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ubr7Q8BU04 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ubr7Q8BU04 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ubr7Q8BU04 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.94■□□□□ 0.3
Ubr7Q8BU04 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ubr7Q8BU04 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ubr7Q8BU04 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ubr7Q8BU04 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.94■□□□□ 0.3
Ubr7Q8BU04 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ubr7Q8BU04 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ubr7Q8BU04 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ubr7Q8BU04 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ubr7Q8BU04 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ubr7Q8BU04 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ubr7Q8BU04 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.93■□□□□ 0.3
Ubr7Q8BU04 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ubr7Q8BU04 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ubr7Q8BU04 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ubr7Q8BU04 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.93■□□□□ 0.3
Ubr7Q8BU04 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ubr7Q8BU04 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ubr7Q8BU04 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ubr7Q8BU04 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Ubr7Q8BU04 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ubr7Q8BU04 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Ubr7Q8BU04 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ubr7Q8BU04 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ubr7Q8BU04 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ubr7Q8BU04 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ubr7Q8BU04 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Ubr7Q8BU04 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ubr7Q8BU04 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ubr7Q8BU04 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ubr7Q8BU04 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ubr7Q8BU04 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ubr7Q8BU04 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Ubr7Q8BU04 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ubr7Q8BU04 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ubr7Q8BU04 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.92■□□□□ 0.3
Ubr7Q8BU04 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ubr7Q8BU04 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ubr7Q8BU04 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ubr7Q8BU04 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ubr7Q8BU04 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ubr7Q8BU04 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ubr7Q8BU04 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ubr7Q8BU04 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.91■□□□□ 0.3
Ubr7Q8BU04 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms