Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cdk5rap1Q8BTW8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cdk5rap1Q8BTW8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Cdk5rap1Q8BTW8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cdk5rap1Q8BTW8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdk5rap1Q8BTW8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdk5rap1Q8BTW8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cdk5rap1Q8BTW8 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cdk5rap1Q8BTW8 Ank2-226ENSMUST00000189368 339 ntBASIC15.95■□□□□ 0.14
Cdk5rap1Q8BTW8 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdk5rap1Q8BTW8 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdk5rap1Q8BTW8 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.95■□□□□ 0.14
Cdk5rap1Q8BTW8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdk5rap1Q8BTW8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cdk5rap1Q8BTW8 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdk5rap1Q8BTW8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.95■□□□□ 0.14
Cdk5rap1Q8BTW8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdk5rap1Q8BTW8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
Cdk5rap1Q8BTW8 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdk5rap1Q8BTW8 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdk5rap1Q8BTW8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdk5rap1Q8BTW8 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdk5rap1Q8BTW8 Gm45328-201ENSMUST00000210942 917 ntBASIC15.94■□□□□ 0.14
Cdk5rap1Q8BTW8 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.94■□□□□ 0.14
Cdk5rap1Q8BTW8 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdk5rap1Q8BTW8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cdk5rap1Q8BTW8 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdk5rap1Q8BTW8 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Cdk5rap1Q8BTW8 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdk5rap1Q8BTW8 Phf7-203ENSMUST00000226565 1971 ntBASIC15.94■□□□□ 0.14
Cdk5rap1Q8BTW8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.94■□□□□ 0.14
Cdk5rap1Q8BTW8 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.94■□□□□ 0.14
Cdk5rap1Q8BTW8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdk5rap1Q8BTW8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdk5rap1Q8BTW8 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdk5rap1Q8BTW8 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Cdk5rap1Q8BTW8 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cdk5rap1Q8BTW8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cdk5rap1Q8BTW8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cdk5rap1Q8BTW8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdk5rap1Q8BTW8 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdk5rap1Q8BTW8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdk5rap1Q8BTW8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdk5rap1Q8BTW8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdk5rap1Q8BTW8 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdk5rap1Q8BTW8 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdk5rap1Q8BTW8 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Cdk5rap1Q8BTW8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdk5rap1Q8BTW8 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.93■□□□□ 0.14
Cdk5rap1Q8BTW8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdk5rap1Q8BTW8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdk5rap1Q8BTW8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdk5rap1Q8BTW8 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdk5rap1Q8BTW8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdk5rap1Q8BTW8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cdk5rap1Q8BTW8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Cdk5rap1Q8BTW8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdk5rap1Q8BTW8 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdk5rap1Q8BTW8 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cdk5rap1Q8BTW8 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdk5rap1Q8BTW8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdk5rap1Q8BTW8 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cdk5rap1Q8BTW8 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdk5rap1Q8BTW8 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdk5rap1Q8BTW8 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Cdk5rap1Q8BTW8 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Cdk5rap1Q8BTW8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cdk5rap1Q8BTW8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdk5rap1Q8BTW8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.92■□□□□ 0.14
Cdk5rap1Q8BTW8 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdk5rap1Q8BTW8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdk5rap1Q8BTW8 Gm9103-201ENSMUST00000119371 405 ntBASIC15.92■□□□□ 0.14
Cdk5rap1Q8BTW8 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.92■□□□□ 0.14
Cdk5rap1Q8BTW8 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.92■□□□□ 0.14
Cdk5rap1Q8BTW8 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.92■□□□□ 0.14
Cdk5rap1Q8BTW8 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdk5rap1Q8BTW8 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdk5rap1Q8BTW8 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdk5rap1Q8BTW8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdk5rap1Q8BTW8 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdk5rap1Q8BTW8 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdk5rap1Q8BTW8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Cdk5rap1Q8BTW8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdk5rap1Q8BTW8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.92■□□□□ 0.14
Cdk5rap1Q8BTW8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdk5rap1Q8BTW8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdk5rap1Q8BTW8 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.92■□□□□ 0.14
Cdk5rap1Q8BTW8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdk5rap1Q8BTW8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cdk5rap1Q8BTW8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.91■□□□□ 0.14
Cdk5rap1Q8BTW8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdk5rap1Q8BTW8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdk5rap1Q8BTW8 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cdk5rap1Q8BTW8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdk5rap1Q8BTW8 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdk5rap1Q8BTW8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdk5rap1Q8BTW8 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.91■□□□□ 0.14
Cdk5rap1Q8BTW8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.91■□□□□ 0.14
Cdk5rap1Q8BTW8 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cdk5rap1Q8BTW8 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms