Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cpsf4Q8BQZ5 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cpsf4Q8BQZ5 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Cpsf4Q8BQZ5 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.34■□□□□ 0.21
Cpsf4Q8BQZ5 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cpsf4Q8BQZ5 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.34■□□□□ 0.21
Cpsf4Q8BQZ5 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.34■□□□□ 0.21
Cpsf4Q8BQZ5 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.34■□□□□ 0.21
Cpsf4Q8BQZ5 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.34■□□□□ 0.21
Cpsf4Q8BQZ5 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cpsf4Q8BQZ5 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cpsf4Q8BQZ5 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cpsf4Q8BQZ5 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cpsf4Q8BQZ5 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Cpsf4Q8BQZ5 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cpsf4Q8BQZ5 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cpsf4Q8BQZ5 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Cpsf4Q8BQZ5 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.34■□□□□ 0.21
Cpsf4Q8BQZ5 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cpsf4Q8BQZ5 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cpsf4Q8BQZ5 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cpsf4Q8BQZ5 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Cpsf4Q8BQZ5 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cpsf4Q8BQZ5 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpsf4Q8BQZ5 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cpsf4Q8BQZ5 Gm43799-201ENSMUST00000201845 579 ntBASIC16.33■□□□□ 0.2
Cpsf4Q8BQZ5 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpsf4Q8BQZ5 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpsf4Q8BQZ5 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpsf4Q8BQZ5 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpsf4Q8BQZ5 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.33■□□□□ 0.2
Cpsf4Q8BQZ5 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpsf4Q8BQZ5 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpsf4Q8BQZ5 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Cpsf4Q8BQZ5 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf4Q8BQZ5 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf4Q8BQZ5 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf4Q8BQZ5 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf4Q8BQZ5 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.32■□□□□ 0.2
Cpsf4Q8BQZ5 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf4Q8BQZ5 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Cpsf4Q8BQZ5 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf4Q8BQZ5 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf4Q8BQZ5 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Cpsf4Q8BQZ5 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.32■□□□□ 0.2
Cpsf4Q8BQZ5 Gm30025-201ENSMUST00000218555 728 ntBASIC16.32■□□□□ 0.2
Cpsf4Q8BQZ5 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cpsf4Q8BQZ5 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf4Q8BQZ5 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf4Q8BQZ5 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf4Q8BQZ5 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf4Q8BQZ5 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf4Q8BQZ5 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf4Q8BQZ5 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf4Q8BQZ5 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf4Q8BQZ5 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Cpsf4Q8BQZ5 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf4Q8BQZ5 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf4Q8BQZ5 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.31■□□□□ 0.2
Cpsf4Q8BQZ5 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf4Q8BQZ5 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf4Q8BQZ5 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf4Q8BQZ5 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf4Q8BQZ5 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.31■□□□□ 0.2
Cpsf4Q8BQZ5 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf4Q8BQZ5 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf4Q8BQZ5 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf4Q8BQZ5 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf4Q8BQZ5 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf4Q8BQZ5 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf4Q8BQZ5 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.31■□□□□ 0.2
Cpsf4Q8BQZ5 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf4Q8BQZ5 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.31■□□□□ 0.2
Cpsf4Q8BQZ5 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf4Q8BQZ5 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf4Q8BQZ5 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.31■□□□□ 0.2
Cpsf4Q8BQZ5 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf4Q8BQZ5 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf4Q8BQZ5 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf4Q8BQZ5 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf4Q8BQZ5 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf4Q8BQZ5 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf4Q8BQZ5 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf4Q8BQZ5 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf4Q8BQZ5 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf4Q8BQZ5 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cpsf4Q8BQZ5 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf4Q8BQZ5 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf4Q8BQZ5 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf4Q8BQZ5 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf4Q8BQZ5 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf4Q8BQZ5 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf4Q8BQZ5 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf4Q8BQZ5 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.3■□□□□ 0.2
Cpsf4Q8BQZ5 Gm11539-201ENSMUST00000119837 557 ntBASIC16.3■□□□□ 0.2
Cpsf4Q8BQZ5 Gm13436-201ENSMUST00000120418 567 ntBASIC16.3■□□□□ 0.2
Cpsf4Q8BQZ5 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.3■□□□□ 0.2
Cpsf4Q8BQZ5 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.3■□□□□ 0.2
Cpsf4Q8BQZ5 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf4Q8BQZ5 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms