Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smco3Q8BQM7 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Smco3Q8BQM7 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smco3Q8BQM7 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smco3Q8BQM7 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smco3Q8BQM7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smco3Q8BQM7 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smco3Q8BQM7 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smco3Q8BQM7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smco3Q8BQM7 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smco3Q8BQM7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.92□□□□□ -0.18
Smco3Q8BQM7 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smco3Q8BQM7 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smco3Q8BQM7 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smco3Q8BQM7 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Smco3Q8BQM7 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smco3Q8BQM7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smco3Q8BQM7 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smco3Q8BQM7 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.91□□□□□ -0.18
Smco3Q8BQM7 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smco3Q8BQM7 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smco3Q8BQM7 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smco3Q8BQM7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC13.91□□□□□ -0.18
Smco3Q8BQM7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC13.91□□□□□ -0.18
Smco3Q8BQM7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smco3Q8BQM7 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smco3Q8BQM7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Smco3Q8BQM7 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.91□□□□□ -0.18
Smco3Q8BQM7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smco3Q8BQM7 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smco3Q8BQM7 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Smco3Q8BQM7 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smco3Q8BQM7 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.91□□□□□ -0.18
Smco3Q8BQM7 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.91□□□□□ -0.18
Smco3Q8BQM7 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smco3Q8BQM7 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smco3Q8BQM7 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.91□□□□□ -0.18
Smco3Q8BQM7 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smco3Q8BQM7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smco3Q8BQM7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smco3Q8BQM7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smco3Q8BQM7 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smco3Q8BQM7 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smco3Q8BQM7 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smco3Q8BQM7 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smco3Q8BQM7 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smco3Q8BQM7 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smco3Q8BQM7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smco3Q8BQM7 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.9□□□□□ -0.18
Smco3Q8BQM7 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Smco3Q8BQM7 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.9□□□□□ -0.18
Smco3Q8BQM7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smco3Q8BQM7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC13.9□□□□□ -0.18
Smco3Q8BQM7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Smco3Q8BQM7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smco3Q8BQM7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smco3Q8BQM7 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Smco3Q8BQM7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smco3Q8BQM7 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smco3Q8BQM7 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Smco3Q8BQM7 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smco3Q8BQM7 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smco3Q8BQM7 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smco3Q8BQM7 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Smco3Q8BQM7 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smco3Q8BQM7 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Smco3Q8BQM7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smco3Q8BQM7 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smco3Q8BQM7 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smco3Q8BQM7 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smco3Q8BQM7 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smco3Q8BQM7 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Smco3Q8BQM7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smco3Q8BQM7 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smco3Q8BQM7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smco3Q8BQM7 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smco3Q8BQM7 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smco3Q8BQM7 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smco3Q8BQM7 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smco3Q8BQM7 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smco3Q8BQM7 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smco3Q8BQM7 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smco3Q8BQM7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smco3Q8BQM7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC13.89□□□□□ -0.19
Smco3Q8BQM7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smco3Q8BQM7 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smco3Q8BQM7 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smco3Q8BQM7 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smco3Q8BQM7 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.89□□□□□ -0.19
Smco3Q8BQM7 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smco3Q8BQM7 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smco3Q8BQM7 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Smco3Q8BQM7 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smco3Q8BQM7 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smco3Q8BQM7 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smco3Q8BQM7 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smco3Q8BQM7 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smco3Q8BQM7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC13.88□□□□□ -0.19
Smco3Q8BQM7 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smco3Q8BQM7 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms