Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh20Q8BIZ0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh20Q8BIZ0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh20Q8BIZ0 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh20Q8BIZ0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdh20Q8BIZ0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh20Q8BIZ0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh20Q8BIZ0 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.43■□□□□ 0.22
Pcdh20Q8BIZ0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Pcdh20Q8BIZ0 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh20Q8BIZ0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh20Q8BIZ0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdh20Q8BIZ0 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.43■□□□□ 0.22
Pcdh20Q8BIZ0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh20Q8BIZ0 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.43■□□□□ 0.22
Pcdh20Q8BIZ0 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh20Q8BIZ0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Pcdh20Q8BIZ0 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh20Q8BIZ0 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh20Q8BIZ0 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh20Q8BIZ0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh20Q8BIZ0 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.43■□□□□ 0.22
Pcdh20Q8BIZ0 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Pcdh20Q8BIZ0 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh20Q8BIZ0 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh20Q8BIZ0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Pcdh20Q8BIZ0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh20Q8BIZ0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh20Q8BIZ0 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Pcdh20Q8BIZ0 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh20Q8BIZ0 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdh20Q8BIZ0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh20Q8BIZ0 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh20Q8BIZ0 Mir8112-201ENSMUST00000184382 131 ntBASIC16.42■□□□□ 0.22
Pcdh20Q8BIZ0 Timm23-208ENSMUST00000226683 750 ntBASIC16.42■□□□□ 0.22
Pcdh20Q8BIZ0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh20Q8BIZ0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Pcdh20Q8BIZ0 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh20Q8BIZ0 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Pcdh20Q8BIZ0 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh20Q8BIZ0 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh20Q8BIZ0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh20Q8BIZ0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh20Q8BIZ0 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh20Q8BIZ0 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh20Q8BIZ0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh20Q8BIZ0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh20Q8BIZ0 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh20Q8BIZ0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh20Q8BIZ0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdh20Q8BIZ0 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh20Q8BIZ0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Pcdh20Q8BIZ0 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh20Q8BIZ0 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.41■□□□□ 0.22
Pcdh20Q8BIZ0 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh20Q8BIZ0 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Pcdh20Q8BIZ0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh20Q8BIZ0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdh20Q8BIZ0 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdh20Q8BIZ0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Pcdh20Q8BIZ0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.41■□□□□ 0.22
Pcdh20Q8BIZ0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.41■□□□□ 0.22
Pcdh20Q8BIZ0 Gm29791-202ENSMUST00000207888 369 ntBASIC16.41■□□□□ 0.22
Pcdh20Q8BIZ0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.41■□□□□ 0.22
Pcdh20Q8BIZ0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh20Q8BIZ0 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.41■□□□□ 0.22
Pcdh20Q8BIZ0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh20Q8BIZ0 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh20Q8BIZ0 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh20Q8BIZ0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Pcdh20Q8BIZ0 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh20Q8BIZ0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh20Q8BIZ0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh20Q8BIZ0 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh20Q8BIZ0 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh20Q8BIZ0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
Pcdh20Q8BIZ0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh20Q8BIZ0 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh20Q8BIZ0 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh20Q8BIZ0 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh20Q8BIZ0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh20Q8BIZ0 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pcdh20Q8BIZ0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Pcdh20Q8BIZ0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh20Q8BIZ0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh20Q8BIZ0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Pcdh20Q8BIZ0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Pcdh20Q8BIZ0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdh20Q8BIZ0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh20Q8BIZ0 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.4■□□□□ 0.22
Pcdh20Q8BIZ0 Gm21814-202ENSMUST00000203277 873 ntBASIC16.4■□□□□ 0.22
Pcdh20Q8BIZ0 Odf3b-204ENSMUST00000227834 930 ntBASIC16.4■□□□□ 0.22
Pcdh20Q8BIZ0 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh20Q8BIZ0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh20Q8BIZ0 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdh20Q8BIZ0 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh20Q8BIZ0 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.4■□□□□ 0.22
Pcdh20Q8BIZ0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh20Q8BIZ0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh20Q8BIZ0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms