Protein–RNA interactions for Protein: Q8BIG4

Fbxo28, F-box only protein 28, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fbxo28Q8BIG4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Fbxo28Q8BIG4 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Fbxo28Q8BIG4 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
Fbxo28Q8BIG4 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Fbxo28Q8BIG4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Fbxo28Q8BIG4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Fbxo28Q8BIG4 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Fbxo28Q8BIG4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Fbxo28Q8BIG4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Fbxo28Q8BIG4 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Fbxo28Q8BIG4 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Fbxo28Q8BIG4 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Fbxo28Q8BIG4 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.01■□□□□ 0.63
Fbxo28Q8BIG4 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Fbxo28Q8BIG4 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Fbxo28Q8BIG4 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Fbxo28Q8BIG4 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.01■□□□□ 0.63
Fbxo28Q8BIG4 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.01■□□□□ 0.63
Fbxo28Q8BIG4 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Fbxo28Q8BIG4 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Fbxo28Q8BIG4 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Fbxo28Q8BIG4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Fbxo28Q8BIG4 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Fbxo28Q8BIG4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Fbxo28Q8BIG4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19■□□□□ 0.63
Fbxo28Q8BIG4 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Fbxo28Q8BIG4 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Fbxo28Q8BIG4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Fbxo28Q8BIG4 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Fbxo28Q8BIG4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Fbxo28Q8BIG4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Fbxo28Q8BIG4 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19■□□□□ 0.63
Fbxo28Q8BIG4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19■□□□□ 0.63
Fbxo28Q8BIG4 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19■□□□□ 0.63
Fbxo28Q8BIG4 Mzt1-203ENSMUST00000227948 952 ntBASIC19■□□□□ 0.63
Fbxo28Q8BIG4 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Fbxo28Q8BIG4 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Fbxo28Q8BIG4 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19■□□□□ 0.63
Fbxo28Q8BIG4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19■□□□□ 0.63
Fbxo28Q8BIG4 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Fbxo28Q8BIG4 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Fbxo28Q8BIG4 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Fbxo28Q8BIG4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Fbxo28Q8BIG4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Fbxo28Q8BIG4 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19■□□□□ 0.63
Fbxo28Q8BIG4 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19■□□□□ 0.63
Fbxo28Q8BIG4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Fbxo28Q8BIG4 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Fbxo28Q8BIG4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Fbxo28Q8BIG4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Fbxo28Q8BIG4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Fbxo28Q8BIG4 Gm43347-201ENSMUST00000200226 580 ntBASIC18.99■□□□□ 0.63
Fbxo28Q8BIG4 Gm5864-201ENSMUST00000202263 970 ntBASIC18.99■□□□□ 0.63
Fbxo28Q8BIG4 Gm44771-201ENSMUST00000206975 626 ntBASIC18.99■□□□□ 0.63
Fbxo28Q8BIG4 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Fbxo28Q8BIG4 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.99■□□□□ 0.63
Fbxo28Q8BIG4 Rarb-207ENSMUST00000225921 2756 ntBASIC18.99■□□□□ 0.63
Fbxo28Q8BIG4 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Fbxo28Q8BIG4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Fbxo28Q8BIG4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Fbxo28Q8BIG4 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Fbxo28Q8BIG4 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Fbxo28Q8BIG4 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Fbxo28Q8BIG4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Fbxo28Q8BIG4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Fbxo28Q8BIG4 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Fbxo28Q8BIG4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Fbxo28Q8BIG4 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Fbxo28Q8BIG4 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.98■□□□□ 0.63
Fbxo28Q8BIG4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Fbxo28Q8BIG4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.98■□□□□ 0.63
Fbxo28Q8BIG4 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Fbxo28Q8BIG4 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.98■□□□□ 0.63
Fbxo28Q8BIG4 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.98■□□□□ 0.63
Fbxo28Q8BIG4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Fbxo28Q8BIG4 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Fbxo28Q8BIG4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.98■□□□□ 0.63
Fbxo28Q8BIG4 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Fbxo28Q8BIG4 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Fbxo28Q8BIG4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.98■□□□□ 0.63
Fbxo28Q8BIG4 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Fbxo28Q8BIG4 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Fbxo28Q8BIG4 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.97■□□□□ 0.63
Fbxo28Q8BIG4 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Fbxo28Q8BIG4 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Fbxo28Q8BIG4 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Fbxo28Q8BIG4 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Fbxo28Q8BIG4 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.97■□□□□ 0.63
Fbxo28Q8BIG4 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Fbxo28Q8BIG4 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Fbxo28Q8BIG4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Fbxo28Q8BIG4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Fbxo28Q8BIG4 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Fbxo28Q8BIG4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Fbxo28Q8BIG4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Fbxo28Q8BIG4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Fbxo28Q8BIG4 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Fbxo28Q8BIG4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Fbxo28Q8BIG4 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Fbxo28Q8BIG4 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms