Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf38Q8BI21 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf38Q8BI21 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf38Q8BI21 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf38Q8BI21 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf38Q8BI21 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf38Q8BI21 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf38Q8BI21 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Rnf38Q8BI21 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf38Q8BI21 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf38Q8BI21 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf38Q8BI21 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf38Q8BI21 Gm12382-201ENSMUST00000122005 922 ntBASIC16.25■□□□□ 0.19
Rnf38Q8BI21 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Rnf38Q8BI21 Gm27011-201ENSMUST00000182352 972 ntBASIC16.25■□□□□ 0.19
Rnf38Q8BI21 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf38Q8BI21 Gm18666-201ENSMUST00000190039 958 ntBASIC16.25■□□□□ 0.19
Rnf38Q8BI21 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.25■□□□□ 0.19
Rnf38Q8BI21 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Rnf38Q8BI21 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf38Q8BI21 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf38Q8BI21 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.25■□□□□ 0.19
Rnf38Q8BI21 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf38Q8BI21 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf38Q8BI21 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf38Q8BI21 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf38Q8BI21 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf38Q8BI21 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf38Q8BI21 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
Rnf38Q8BI21 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf38Q8BI21 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf38Q8BI21 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf38Q8BI21 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf38Q8BI21 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf38Q8BI21 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf38Q8BI21 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Rnf38Q8BI21 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf38Q8BI21 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.24■□□□□ 0.19
Rnf38Q8BI21 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.24■□□□□ 0.19
Rnf38Q8BI21 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.24■□□□□ 0.19
Rnf38Q8BI21 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf38Q8BI21 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Rnf38Q8BI21 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf38Q8BI21 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf38Q8BI21 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf38Q8BI21 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf38Q8BI21 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf38Q8BI21 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf38Q8BI21 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf38Q8BI21 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf38Q8BI21 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Rnf38Q8BI21 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf38Q8BI21 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Rnf38Q8BI21 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Rnf38Q8BI21 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Rnf38Q8BI21 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf38Q8BI21 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf38Q8BI21 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf38Q8BI21 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf38Q8BI21 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf38Q8BI21 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf38Q8BI21 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Rnf38Q8BI21 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf38Q8BI21 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.23■□□□□ 0.19
Rnf38Q8BI21 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf38Q8BI21 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Rnf38Q8BI21 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf38Q8BI21 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf38Q8BI21 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Rnf38Q8BI21 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Rnf38Q8BI21 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf38Q8BI21 Gm5643-201ENSMUST00000117081 966 ntBASIC16.22■□□□□ 0.19
Rnf38Q8BI21 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.22■□□□□ 0.19
Rnf38Q8BI21 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Rnf38Q8BI21 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf38Q8BI21 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf38Q8BI21 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf38Q8BI21 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf38Q8BI21 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf38Q8BI21 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf38Q8BI21 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf38Q8BI21 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf38Q8BI21 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf38Q8BI21 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.21■□□□□ 0.19
Rnf38Q8BI21 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf38Q8BI21 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf38Q8BI21 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf38Q8BI21 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Rnf38Q8BI21 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Rnf38Q8BI21 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf38Q8BI21 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf38Q8BI21 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf38Q8BI21 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.21■□□□□ 0.19
Rnf38Q8BI21 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf38Q8BI21 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.21■□□□□ 0.19
Rnf38Q8BI21 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.21■□□□□ 0.19
Rnf38Q8BI21 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf38Q8BI21 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf38Q8BI21 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf38Q8BI21 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms