Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ttc28Q80XJ3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Ttc28Q80XJ3 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Ttc28Q80XJ3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ttc28Q80XJ3 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.12□□□□□ -0.15
Ttc28Q80XJ3 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.11□□□□□ -0.15
Ttc28Q80XJ3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ttc28Q80XJ3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.11□□□□□ -0.15
Ttc28Q80XJ3 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ttc28Q80XJ3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ttc28Q80XJ3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14.11□□□□□ -0.15
Ttc28Q80XJ3 Gm13036-201ENSMUST00000117799 748 ntBASIC14.11□□□□□ -0.15
Ttc28Q80XJ3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.11□□□□□ -0.15
Ttc28Q80XJ3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ttc28Q80XJ3 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Ttc28Q80XJ3 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.11□□□□□ -0.15
Ttc28Q80XJ3 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ttc28Q80XJ3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ttc28Q80XJ3 Gm14494-201ENSMUST00000118786 435 ntBASIC14.1□□□□□ -0.15
Ttc28Q80XJ3 Gm14140-201ENSMUST00000119999 995 ntBASIC14.1□□□□□ -0.15
Ttc28Q80XJ3 Gm9727-201ENSMUST00000161387 555 ntBASIC14.1□□□□□ -0.15
Ttc28Q80XJ3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
Ttc28Q80XJ3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ttc28Q80XJ3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ttc28Q80XJ3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ttc28Q80XJ3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ttc28Q80XJ3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ttc28Q80XJ3 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ttc28Q80XJ3 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ttc28Q80XJ3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ttc28Q80XJ3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.1□□□□□ -0.15
Ttc28Q80XJ3 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ttc28Q80XJ3 Gm29707-201ENSMUST00000196325 491 ntBASIC14.1□□□□□ -0.15
Ttc28Q80XJ3 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ttc28Q80XJ3 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.1□□□□□ -0.15
Ttc28Q80XJ3 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ttc28Q80XJ3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ttc28Q80XJ3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Ttc28Q80XJ3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Ttc28Q80XJ3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ttc28Q80XJ3 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ttc28Q80XJ3 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.09□□□□□ -0.15
Ttc28Q80XJ3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.09□□□□□ -0.15
Ttc28Q80XJ3 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.09□□□□□ -0.15
Ttc28Q80XJ3 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.09□□□□□ -0.15
Ttc28Q80XJ3 Gm6550-201ENSMUST00000187574 993 ntBASIC14.09□□□□□ -0.15
Ttc28Q80XJ3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ttc28Q80XJ3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ttc28Q80XJ3 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ttc28Q80XJ3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ttc28Q80XJ3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ttc28Q80XJ3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ttc28Q80XJ3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ttc28Q80XJ3 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ttc28Q80XJ3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ttc28Q80XJ3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ttc28Q80XJ3 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.09□□□□□ -0.15
Ttc28Q80XJ3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.09□□□□□ -0.15
Ttc28Q80XJ3 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.09□□□□□ -0.15
Ttc28Q80XJ3 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.09□□□□□ -0.15
Ttc28Q80XJ3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ttc28Q80XJ3 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ttc28Q80XJ3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ttc28Q80XJ3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ttc28Q80XJ3 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ttc28Q80XJ3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ttc28Q80XJ3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ttc28Q80XJ3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ttc28Q80XJ3 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ttc28Q80XJ3 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ttc28Q80XJ3 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ttc28Q80XJ3 Gm14822-201ENSMUST00000122247 291 ntBASIC14.08□□□□□ -0.15
Ttc28Q80XJ3 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.08□□□□□ -0.15
Ttc28Q80XJ3 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ttc28Q80XJ3 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ttc28Q80XJ3 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ttc28Q80XJ3 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ttc28Q80XJ3 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ttc28Q80XJ3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc28Q80XJ3 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.08□□□□□ -0.16
Ttc28Q80XJ3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ttc28Q80XJ3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.08□□□□□ -0.16
Ttc28Q80XJ3 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc28Q80XJ3 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc28Q80XJ3 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc28Q80XJ3 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ttc28Q80XJ3 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.08□□□□□ -0.16
Ttc28Q80XJ3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc28Q80XJ3 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc28Q80XJ3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc28Q80XJ3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Ttc28Q80XJ3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc28Q80XJ3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc28Q80XJ3 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc28Q80XJ3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc28Q80XJ3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc28Q80XJ3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc28Q80XJ3 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc28Q80XJ3 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.07□□□□□ -0.16
Ttc28Q80XJ3 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms