Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vrk1Q80X41 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vrk1Q80X41 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vrk1Q80X41 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vrk1Q80X41 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Vrk1Q80X41 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.03■□□□□ 0.16
Vrk1Q80X41 Gm11336-201ENSMUST00000118168 334 ntBASIC16.03■□□□□ 0.16
Vrk1Q80X41 Gm15794-201ENSMUST00000120182 631 ntBASIC16.03■□□□□ 0.16
Vrk1Q80X41 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.03■□□□□ 0.16
Vrk1Q80X41 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vrk1Q80X41 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.03■□□□□ 0.16
Vrk1Q80X41 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Vrk1Q80X41 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vrk1Q80X41 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Vrk1Q80X41 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Vrk1Q80X41 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Vrk1Q80X41 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Vrk1Q80X41 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Vrk1Q80X41 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Vrk1Q80X41 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vrk1Q80X41 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vrk1Q80X41 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vrk1Q80X41 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Vrk1Q80X41 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vrk1Q80X41 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vrk1Q80X41 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Vrk1Q80X41 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vrk1Q80X41 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.02■□□□□ 0.16
Vrk1Q80X41 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Vrk1Q80X41 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Vrk1Q80X41 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vrk1Q80X41 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vrk1Q80X41 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vrk1Q80X41 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vrk1Q80X41 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Vrk1Q80X41 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vrk1Q80X41 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vrk1Q80X41 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vrk1Q80X41 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vrk1Q80X41 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vrk1Q80X41 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Vrk1Q80X41 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vrk1Q80X41 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vrk1Q80X41 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vrk1Q80X41 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Vrk1Q80X41 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vrk1Q80X41 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vrk1Q80X41 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vrk1Q80X41 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Vrk1Q80X41 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Vrk1Q80X41 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Vrk1Q80X41 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.01■□□□□ 0.15
Vrk1Q80X41 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.01■□□□□ 0.15
Vrk1Q80X41 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
Vrk1Q80X41 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vrk1Q80X41 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vrk1Q80X41 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Vrk1Q80X41 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vrk1Q80X41 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vrk1Q80X41 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vrk1Q80X41 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vrk1Q80X41 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Vrk1Q80X41 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vrk1Q80X41 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vrk1Q80X41 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vrk1Q80X41 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Vrk1Q80X41 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vrk1Q80X41 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16■□□□□ 0.15
Vrk1Q80X41 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16■□□□□ 0.15
Vrk1Q80X41 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vrk1Q80X41 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16■□□□□ 0.15
Vrk1Q80X41 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Vrk1Q80X41 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Vrk1Q80X41 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16■□□□□ 0.15
Vrk1Q80X41 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vrk1Q80X41 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Vrk1Q80X41 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vrk1Q80X41 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.99■□□□□ 0.15
Vrk1Q80X41 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vrk1Q80X41 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Vrk1Q80X41 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
Vrk1Q80X41 Gm13186-201ENSMUST00000118031 316 ntBASIC15.99■□□□□ 0.15
Vrk1Q80X41 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Vrk1Q80X41 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.99■□□□□ 0.15
Vrk1Q80X41 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vrk1Q80X41 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vrk1Q80X41 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.99■□□□□ 0.15
Vrk1Q80X41 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vrk1Q80X41 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vrk1Q80X41 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vrk1Q80X41 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vrk1Q80X41 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vrk1Q80X41 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vrk1Q80X41 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vrk1Q80X41 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vrk1Q80X41 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vrk1Q80X41 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vrk1Q80X41 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vrk1Q80X41 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Vrk1Q80X41 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms